| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2900 |
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| Symbol | |
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| ID | 5671287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3414988 |
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| End bp | 3416349 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641241807 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001507227 |
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| Protein GI | 158314719 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.95287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCG ACCACGGTGG GGCGACACAG TCGAGCCCCG GGAACACGAG CGAGCTTCGT
CGGGTGATCC TGGCCAGCTA CCTGGGCAGC GCCGTGGAGT ACTACGACTT CCTGCTCTAC
GTGACGGCGG CCAGCCTGAT CTTCAACGAC CTGTTCTTCA GCCAGCTCTC CTCGACCATG
GGGACGATCG CCTCCCTGGG AACGCTGGCC GTCGGCTACG CCGCGCGTCC GCTGGGAGCG
TTAATCTTCG GCCACTTCGG TGATCGGATC GGGCGCAAGT CAGTACTCAT CGTCACGCTC
CTCACGATGG GGATCTCGAC CGCGCTGATC GGGGTACTGC CCACCAGCGA GCAGGTCGGG
GCGCTTGCTC CCGCGCTACT GATCACGCTG CGCATCTTCC AGGGGATCTC AGTGGGAGGC
GAGTGGGGCG GCGCGGCGCT GATGACCTTC GAGCACGCCC CCGCGCACCG GCGCGGGTTC
GCGTCGAGCT TCGCCGGTGC CGGCGGGCCG ACCGGAACGG CACTGGCAGC CGGAATGCTT
GCCCTGTTCT CCCTGCTTCC CGATGAGCAG TTCGACACCT GGGGATGGCG AGTGCCGTTC
CTCTTCAGCG CCGTTATGGT CGGGATCGGC ATGTGGGCGC GTCTGCGTGT CTCGGAGTCG
CCGCTGTTCG TCGAGGAGAA GATCCGGCAG CAGCAGTCCG AGGAGGAGGT CGCCCCGCCG
ATCTGGCGGG TGCTCCGCTC CCCCATCGGC CTGCTCTCCG CATTCTTCGC GCTGCTGGCG
CCGTTCACCT TCAACAGCCT GGCCGGCTCC TTCGCACTCA CCTACTCGAA GGAGAACGGA
CTGCACGTGT CATCAGTTCT CAGCATCCAG GTGGTCGGCG CGGTGGTCTG CGTCGTCTGC
GAGATCGCTT CCGGCACTCT CTCCGACCGC TACGGGAGGC GTGTGATCAT GGGTTTCGGC
ATGCTCGCAG GAGCCCTCCT GACCTACCCA TTCCTGCAGC TGATTGGCTC AGGCCACTAC
GCGCCGACGA TGCTCGGCTT CGTGCTCGTG TACGGCCTGG TCATCGGGCC CATGTTCGGC
GTGTGCCAGG CATTCGTCAG CGAGCAGTTC GACACCGGCT CCCGTTACAC CGGGGCTTCG
CTGGGCTACC AGGCCGCCTC AACACTCGGA GGCGGGTTCG TGCCGATCAT CCTGGCGGCG
CTCCACGACT CGCGGGGCGG TGGCCTGGGC CAGATCACGC TGTTCGTGAT CGCGGTCGGA
TTTTTCGGCG TCGCGACACT GGTGGCCACG TCACGTCGTC GACGGATGCG CCCGCTCGCT
CCCCCGCTGC CGGTACCAGC CACCTCGGTC CTGGCGGACT GA
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| Protein sequence | MGGDHGGATQ SSPGNTSELR RVILASYLGS AVEYYDFLLY VTAASLIFND LFFSQLSSTM
GTIASLGTLA VGYAARPLGA LIFGHFGDRI GRKSVLIVTL LTMGISTALI GVLPTSEQVG
ALAPALLITL RIFQGISVGG EWGGAALMTF EHAPAHRRGF ASSFAGAGGP TGTALAAGML
ALFSLLPDEQ FDTWGWRVPF LFSAVMVGIG MWARLRVSES PLFVEEKIRQ QQSEEEVAPP
IWRVLRSPIG LLSAFFALLA PFTFNSLAGS FALTYSKENG LHVSSVLSIQ VVGAVVCVVC
EIASGTLSDR YGRRVIMGFG MLAGALLTYP FLQLIGSGHY APTMLGFVLV YGLVIGPMFG
VCQAFVSEQF DTGSRYTGAS LGYQAASTLG GGFVPIILAA LHDSRGGGLG QITLFVIAVG
FFGVATLVAT SRRRRMRPLA PPLPVPATSV LAD
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