Gene Franean1_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2889 
Symbol 
ID5671276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3404258 
End bp3404767 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID641241796 
Producthydratase/decarboxylase 
Protein accessionYP_001507216 
Protein GI158314708 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACGG AGTCGACCGG TTTTTGTCAG CCGCGCATCG AGCCGGAGAT CTGCTTCCGA 
TTGGCCCGGC CGCTACGCGG CCCCGATGTC ACCATCGCGG ACGTGCTGAG TGCAACCGAG
GCCGTCGCGC CCGCGCTGGA GATCGTCGAC AGTCGGATCC GCGACTGGAA GATCACATTG
GTCGACAGGG TCGCCGACAA CGCCAGCGCC GCCGGGCTGG TCTACGAGGC CTGGACATCT
CTGGACAATG TTCTTGATCT TGCTGCTGTC ACCGTCGACC TGATCGTCGA TGGAGACCGC
GTAGTGACAG GCAGCGGACG GGAGGTCCTT GGCCATCCCG CCGCCGCAGT CGCCTGGCTG
GCCAACAGCC TCGCCACCTT CGGTACCGCA CTGGAATCCG GGCACCTGGT ACTGCCCGGC
GCCATGACCA CCGCCCCCTT CATCAGCGCT GGCCAGAAGA CCGAAGCGAG CTTCAGCGCC
CTAGGCTCGG TCTCGGTGAC TCTGATCTAA
 
Protein sequence
MATESTGFCQ PRIEPEICFR LARPLRGPDV TIADVLSATE AVAPALEIVD SRIRDWKITL 
VDRVADNASA AGLVYEAWTS LDNVLDLAAV TVDLIVDGDR VVTGSGREVL GHPAAAVAWL
ANSLATFGTA LESGHLVLPG AMTTAPFISA GQKTEASFSA LGSVSVTLI