Gene Franean1_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2876 
Symbol 
ID5671265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3389764 
End bp3390873 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content68% 
IMG OID641241785 
Producthypothetical protein 
Protein accessionYP_001507205 
Protein GI158314697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.208027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTCCC AGATCACCAT GAACTGGCGA GGCAGGCCAC TGACCAGCCA CGAAGTCGTC 
GTGAACACCA TCGCGGCGAC CCGAACCCGC AGCGGACTAC GTGTCGAAGC GCACCTGGAC
ACCAGGGACT ATCCGATCGG CGTCGCCGTC AGCAAAGCCC GCATCGATGC CCTACCGACC
GAACACCACA CGATGCACAG AACATGGAAC TACACAATCC ACCCCACACA CACCGACGGT
ACGGCCCCAC CCGCCGTTAA CGCCGCGACC GGTTCAGACC GGGCAGCGAC CCTGACGCTG
CTGGCCCACC CGCGCCTGAC CGGCATGAGC ATCACCGAGT TGGACGCACT CGCAGAACAG
CTGGCGCCGG AACAGGCGGC CCGCCGGGAG CAGCGCCGCT ACCAGGGACG CGGCGGACCA
CGTCGCCACG CCCCCGGCGC CCACGGCAGA ACCCTGCTCT CGCCCCGCGA CCGGGTCCTG
ATCACCGTCG TTCACCTGCG CCAGGTCTGC TCTCAACGGC TCCTGGCGGA CATGCTGGAA
GTCGCAGCGC GGACGATCGG TCAGGCGGTC ACCGACGTCC GGCATCTCCT GCACGAGCAG
AACATCACGA TCACGCCGAC AACCCTGCGG TTCACCTGCG CCGAGCAGGT CACTGCCTAC
GCGCGCACCG GACAGTACGA CGACGGCCGC CCATCGCTGC CCTGGACGCT GTCCGACCCC
GCGCTGACCG GCATGAGCCG CGCCGACCTC GCCGCACTCA TCGACCAGGT ATCGGTCCGC
CAAGCAGCCG CCGTGGAACG ACGCCGCCAC CAGCAACGCG GCCGCCAGCG CCTCCCCGGA
ACCCGCGGCG GTGTCTTCCC GCAGAAGATC ACCAGCGGGG AACGTGTCCT GGCCGCGATC
CTTCACCACC GCAAAGTCGC CACCGGCCGA GTCCTGGCCG AGCTGTTCGG CGTCAGTCAC
CGCACCATCG GCACCGCCTT CCTCGAAGTC CGCCCCATCC TCGAAGAAGA CGACATCCAC
CTGCCACGAG CACCCGTCAA GTACCGCTCC GCCGAACAGC TCCTCGCGTC TGTCCTGCCG
GCAGACGAGG CCGCCACGCC GACGGGTTAA
 
Protein sequence
MFSQITMNWR GRPLTSHEVV VNTIAATRTR SGLRVEAHLD TRDYPIGVAV SKARIDALPT 
EHHTMHRTWN YTIHPTHTDG TAPPAVNAAT GSDRAATLTL LAHPRLTGMS ITELDALAEQ
LAPEQAARRE QRRYQGRGGP RRHAPGAHGR TLLSPRDRVL ITVVHLRQVC SQRLLADMLE
VAARTIGQAV TDVRHLLHEQ NITITPTTLR FTCAEQVTAY ARTGQYDDGR PSLPWTLSDP
ALTGMSRADL AALIDQVSVR QAAAVERRRH QQRGRQRLPG TRGGVFPQKI TSGERVLAAI
LHHRKVATGR VLAELFGVSH RTIGTAFLEV RPILEEDDIH LPRAPVKYRS AEQLLASVLP
ADEAATPTG