| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2868 |
|---|
| Symbol | |
|---|
| ID | 5671257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3383399 |
|---|
| End bp | 3383965 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641241777 |
|---|
| Product | nucleoside-diphosphate-sugar epimerase |
|---|
| Protein accession | YP_001507197 |
|---|
| Protein GI | 158314689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.288118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTTG CGCACCGCTG GACCGAGGCG CGGCTCGCGG AGGCGCCGTT CGGGGTCACG
ATCCTGCGAA ACGGGCTGTA CTCGCAACTC GCGGCAGGCA TGGCACTGAC GGCGGCGAAG
GACGCGCTGC AGACCGGCGT GCTCGCTCTA CCGTGGGGCG ACGGCCGGCT GGCGACCGTC
GCCCGTGAGG ACCTCGCCGA GGTCGCGGCC CGGGTCGCCG CAGAGTCGGA CGCGGACCTA
CGGGCCGGTC ACCGCGGCCG CCACGCCGGC CGGACATATG AACTCGAAGG CCTGACCGCA
CTGTCCGGCG ACGATCTGGC AGCGCTGCTG GCCGAGGTGT CAGGTCGACC CGTCCGTTAC
GAGTCAGCTC CGCTCTGGGC CGTTCGTTCC GGTCTTGAAG CAGCTGGCCT GCCCGCGCTC
CAGATCACGC ACGCGATCTC GACACTCGCC AACATCGGCG CGGGGTTCCT CGGCCTCCAC
CCCTCCGACC TGCCGCATCT CCTCCCCGCC GCGCCGCGCC AAGGAGCCGA CACGGTCCGT
GCGCTGGTGC GCGCAGAACT GGGCTGA
|
|---|
| Protein sequence | MALAHRWTEA RLAEAPFGVT ILRNGLYSQL AAGMALTAAK DALQTGVLAL PWGDGRLATV
AREDLAEVAA RVAAESDADL RAGHRGRHAG RTYELEGLTA LSGDDLAALL AEVSGRPVRY
ESAPLWAVRS GLEAAGLPAL QITHAISTLA NIGAGFLGLH PSDLPHLLPA APRQGADTVR
ALVRAELG
|
|---|
| |