| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2832 |
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| Symbol | |
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| ID | 5671221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3349571 |
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| End bp | 3350317 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641241741 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001507161 |
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| Protein GI | 158314653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.106168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTCA CGGTCGTCAG CGTGGACCTG TGGGGAACGC TGATCAGCTA CGGCGACCGG
GACGCCGAAG CCGCCTGGCG GGTCCGCGAG TTCCACCTCG CCCTGACTGC GTTCGGCCAC
ACCCTCCCCG CCGAGCACCT GGACACCACG GTCCGAGCGG TCCGTGCCGA ACTACTCGAC
GAGCAGCGAC AGCACGGACG GCAGATCCCG GTTCCCGAGC AGGTCCGCAC GATCGTCCGC
CGGCTCGGTA TCGACGCCGA CGACGCCCTC GTCCAGGTGC TCACGGTCGC GCACACCCAC
GCCGTGCTGC GGGCCTGCCC CCAGCTGATC CCCGGCGCGC ACGCCTGCCT CGCCGCGCTG
TCCGCCGCCG GCTACCGCCT TGTCCTCGCC TCCAACACCC TGGCGACCCC AGGAGCCGTC
ACCCGGCAGA TCCTCGACCG CCACCGGCTC ACCGACCACT TCGACCGGCT GTTCTTCTCC
AGCGAACTCG GTGTCGCCAA ACCCCAGGCC GCGATGTTCC ACGCCATCGC CGAACAGACC
GACACCACCG TCGACCAGGT CGTGCACGTC GGCAACGACT GGCGCACCGA CGTCCGCGGA
GCCCTCGCCG CGGGCTGCCG CGCGGTCTGG TTCAACCCCG GGCGCAAGCC GTCGCGACCC
GAAGCGCCCG ACGCCGCACT GCTCGTCGAC ATCCCCGTAC TGGTCCGGCG ACTCCGCCCC
CCAGACCACG CCCACCGCGG CACCTGA
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| Protein sequence | MSVTVVSVDL WGTLISYGDR DAEAAWRVRE FHLALTAFGH TLPAEHLDTT VRAVRAELLD
EQRQHGRQIP VPEQVRTIVR RLGIDADDAL VQVLTVAHTH AVLRACPQLI PGAHACLAAL
SAAGYRLVLA SNTLATPGAV TRQILDRHRL TDHFDRLFFS SELGVAKPQA AMFHAIAEQT
DTTVDQVVHV GNDWRTDVRG ALAAGCRAVW FNPGRKPSRP EAPDAALLVD IPVLVRRLRP
PDHAHRGT
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