Gene Franean1_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2828 
Symbol 
ID5671217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3346044 
End bp3346583 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content71% 
IMG OID641241737 
Producthypothetical protein 
Protein accessionYP_001507157 
Protein GI158314649 
COG category[R] General function prediction only 
COG ID[COG0645] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTGC AGCTGGCTGG TCTCCCCGGA ACTGGGAAGA GCACTCTCGC CGCCGAACTC 
GGCCGGCACC TGCCCGCCGC AGTCCTCGGC AAGGACCACA TCCGCCACGC CCTGTTCACC
GACCCCTATC TCACCTACAG CCCCGCCCAG GACGACCTGT GCATCGACGT CGCCCACCAG
GCCGCCGCCC ACCTGATCGG CGAAGAGCTC GCACCCGCCG TCGTGCTCGA CGGCCCGACC
TGCCACCGCG CCGGCCAGAT CAGCCGGGTC GCCCACCTCG CCGACCGCCT CGGACGACCC
CTGCACGTCA TCGAGTGCGT CTGCCCGCCG GCCGTCGCGC ACGCACGTCT CACCCACGAC
CACGCCGAGG GCACCCATCC CGCGGCCGAC CGCACTATCG CCCTCTACCA GCGGATTCAC
GCGAACGCGG TTCCCATCCC GGAACCGAAA ATCGTCCTGG CCACGGACAC CGAGCTGGCG
ACCGTCGTCG CGCGCTGCCT CGACCGACTC GGCGTCACCT CTCACGCCGC GCCCAGATAA
 
Protein sequence
MIVQLAGLPG TGKSTLAAEL GRHLPAAVLG KDHIRHALFT DPYLTYSPAQ DDLCIDVAHQ 
AAAHLIGEEL APAVVLDGPT CHRAGQISRV AHLADRLGRP LHVIECVCPP AVAHARLTHD
HAEGTHPAAD RTIALYQRIH ANAVPIPEPK IVLATDTELA TVVARCLDRL GVTSHAAPR