Gene Franean1_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2778 
Symbol 
ID5671167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3285131 
End bp3286159 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content72% 
IMG OID641241687 
Producthypothetical protein 
Protein accessionYP_001507107 
Protein GI158314599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.560665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACGA ATCCTCCGCA GCAGAACCAT CTCGGCCGCC GCACCTACGC CCGACCCGCC 
GCCCGCACCG TCGCGGGCAG TGAGCACCAG CTGTGGCTGG CCCGCCACCT CACCCCCCGG
GACCGGTGGA TCACCCGGAT GCTGCACGAG CACCGGGTCC TGACTACCCA CCAGATCGTC
GAACTCGGCT GGACCGGCCG GCGTGCGGCG AACCTGCGCC TGCTGGAGCT CTACCGCTGG
CGCGTCCTCG ACCGGTTCCA GCCGCTGGTG CCCGCCGGGC TGGCGCCCAT GCATTACATC
CTCGACGTCG CCGGCGCGGC CGTACTGGCG CACGAAGACG GCCTGGACCC GAAGAAGATC
GGCTACCAGC ACGATCGGGC GAAAGGCATC GCCCACTCCC TGCACCTGGC CCACCGGGTC
GCGGTCAACG GCATGTTCAC CCGCCTCATC CACCACGCCC GCCAGCCCGG CGCCGCCGGC
AAGCTGACCG CCTGGTGGCC GGAAGAACGC TGCGCCCGGC ATTTCGGCGA CATCGTCCGC
CCCGACGCCT ACGGCCGCTG GACGACCCGC GGCGGTGCCA CGGTCGAGTG GTTCCTGGAA
CTGGACTACG GCACCGAACC CCTGCACCGC GTCACCGCCA AACTCGCCGC CTACCACCAG
CTCGCTACCA GCACCAGAAT CGCCACCCCG ATCCTGTTGT GGACCACCAC GGCCCGGCGC
GAAGCCCGTC TCCGCGCAGC GATGGCACAG ACGCTGCAGA ACCTCGACCG GCCCGAGCTG
GTGCCGGTCG CCACCACCGC GGCCGACCTC ACCCCACCCG ACCAGCATCT CGACCCCGCC
CTGGCCCGCT GGCTCCCCCT GACCACGACC CGGCCCGGCC GGCTCGGACT GCACCAGCTC
CCCGACGTCC CGCCACACCT ACGCCCCACC GTCCGCCAGG ACGACACCGC CGGCCCGTCG
GACCCGTCCG GCCGGCTGCA CCCGCCGCAC CCGATGCCAC CACCCACCAG CCTGCATCCC
GCTGCCTGA
 
Protein sequence
MITNPPQQNH LGRRTYARPA ARTVAGSEHQ LWLARHLTPR DRWITRMLHE HRVLTTHQIV 
ELGWTGRRAA NLRLLELYRW RVLDRFQPLV PAGLAPMHYI LDVAGAAVLA HEDGLDPKKI
GYQHDRAKGI AHSLHLAHRV AVNGMFTRLI HHARQPGAAG KLTAWWPEER CARHFGDIVR
PDAYGRWTTR GGATVEWFLE LDYGTEPLHR VTAKLAAYHQ LATSTRIATP ILLWTTTARR
EARLRAAMAQ TLQNLDRPEL VPVATTAADL TPPDQHLDPA LARWLPLTTT RPGRLGLHQL
PDVPPHLRPT VRQDDTAGPS DPSGRLHPPH PMPPPTSLHP AA