Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2778 |
Symbol | |
ID | 5671167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3285131 |
End bp | 3286159 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641241687 |
Product | hypothetical protein |
Protein accession | YP_001507107 |
Protein GI | 158314599 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.560665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCACGA ATCCTCCGCA GCAGAACCAT CTCGGCCGCC GCACCTACGC CCGACCCGCC GCCCGCACCG TCGCGGGCAG TGAGCACCAG CTGTGGCTGG CCCGCCACCT CACCCCCCGG GACCGGTGGA TCACCCGGAT GCTGCACGAG CACCGGGTCC TGACTACCCA CCAGATCGTC GAACTCGGCT GGACCGGCCG GCGTGCGGCG AACCTGCGCC TGCTGGAGCT CTACCGCTGG CGCGTCCTCG ACCGGTTCCA GCCGCTGGTG CCCGCCGGGC TGGCGCCCAT GCATTACATC CTCGACGTCG CCGGCGCGGC CGTACTGGCG CACGAAGACG GCCTGGACCC GAAGAAGATC GGCTACCAGC ACGATCGGGC GAAAGGCATC GCCCACTCCC TGCACCTGGC CCACCGGGTC GCGGTCAACG GCATGTTCAC CCGCCTCATC CACCACGCCC GCCAGCCCGG CGCCGCCGGC AAGCTGACCG CCTGGTGGCC GGAAGAACGC TGCGCCCGGC ATTTCGGCGA CATCGTCCGC CCCGACGCCT ACGGCCGCTG GACGACCCGC GGCGGTGCCA CGGTCGAGTG GTTCCTGGAA CTGGACTACG GCACCGAACC CCTGCACCGC GTCACCGCCA AACTCGCCGC CTACCACCAG CTCGCTACCA GCACCAGAAT CGCCACCCCG ATCCTGTTGT GGACCACCAC GGCCCGGCGC GAAGCCCGTC TCCGCGCAGC GATGGCACAG ACGCTGCAGA ACCTCGACCG GCCCGAGCTG GTGCCGGTCG CCACCACCGC GGCCGACCTC ACCCCACCCG ACCAGCATCT CGACCCCGCC CTGGCCCGCT GGCTCCCCCT GACCACGACC CGGCCCGGCC GGCTCGGACT GCACCAGCTC CCCGACGTCC CGCCACACCT ACGCCCCACC GTCCGCCAGG ACGACACCGC CGGCCCGTCG GACCCGTCCG GCCGGCTGCA CCCGCCGCAC CCGATGCCAC CACCCACCAG CCTGCATCCC GCTGCCTGA
|
Protein sequence | MITNPPQQNH LGRRTYARPA ARTVAGSEHQ LWLARHLTPR DRWITRMLHE HRVLTTHQIV ELGWTGRRAA NLRLLELYRW RVLDRFQPLV PAGLAPMHYI LDVAGAAVLA HEDGLDPKKI GYQHDRAKGI AHSLHLAHRV AVNGMFTRLI HHARQPGAAG KLTAWWPEER CARHFGDIVR PDAYGRWTTR GGATVEWFLE LDYGTEPLHR VTAKLAAYHQ LATSTRIATP ILLWTTTARR EARLRAAMAQ TLQNLDRPEL VPVATTAADL TPPDQHLDPA LARWLPLTTT RPGRLGLHQL PDVPPHLRPT VRQDDTAGPS DPSGRLHPPH PMPPPTSLHP AA
|
| |