Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2760 |
Symbol | |
ID | 5671149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3267244 |
End bp | 3268158 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641241669 |
Product | restriction endonuclease-like protein |
Protein accession | YP_001507089 |
Protein GI | 158314581 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAGCG CCGAGCTGCT TGATCGGTTA GGTCGGTTGC GGCGGGCCCA GGTCGGCGCG GTCCGGGTGC CTCACAACCC GCTGCTGCTG TTGTGGCTGT TCGGCCGGCT GGCCGCGACA GGCACCAGCG AGGTGAGCTA TGCGGAGGCG GAGCAGCCGG TCAGCGGGTT GATCAACCAG TTCGGTCCGC CGGTGCGACG GTCAACGGCA CGGCAGCGGG CCGCGATGCC GTTCGTGCAC CTGGAACGCG AACTGTGGGA CCTGCGTGAC GCCGCCGGTG GGCCCCTTGG CCCAGACCTG CCGGAGCGAA GCCGCCTGCT TCACGACCTC GGTGCCGTGG GCCGCCTGCA CCGCCCCGTC GAGCGGGCGC TCCTCGATCC CGGAATGCTT GTCGCCGCCG CGAGGCTGCT GTTGGACCGG CATTTCACGC CCGCGCTCGC ACCGTTGATC TGCGATGTCG CCGGTCTTGA CCTCGGTACG TGGGCCGACT CCACCGGTAT AGCCGGTGGG GATCGGCTTC GGCGACGGCG GAGTGCCACG TTCGCCGAGC AGGTGCTGCG GGTCTACGCC TACTGCTGCG CGGCCTGTGG CTTCGATGGA CGAATCGGGA CAATTCCGGT CGGGGTCGAG GCGGCCCACG TCCGCTGGCA TAGCCAGCAC GGCCCGGACG ACCTCGCTAA CGGCGTGGCG TTGTGCTCGC TTCATCACAC GCTGTTCGAC CTGGGTGTTC TCGGGTTGAC GCCGGACCGG GAACTCAAGG TTTCCGATCT CTACGTCGCT CGGTCGCCGG CCGGACAGGC TGTCTACGCG CTGGCCGGGC GTCCGCTCGC GGTGCCTCTG CCGGGTCAAC CCGCTGTCGA CGCCTGCCAC ATCGCCTGGC ATGACCGCCA GGTCTTCCGC GGTGTAGCGG CATGA
|
Protein sequence | MDSAELLDRL GRLRRAQVGA VRVPHNPLLL LWLFGRLAAT GTSEVSYAEA EQPVSGLINQ FGPPVRRSTA RQRAAMPFVH LERELWDLRD AAGGPLGPDL PERSRLLHDL GAVGRLHRPV ERALLDPGML VAAARLLLDR HFTPALAPLI CDVAGLDLGT WADSTGIAGG DRLRRRRSAT FAEQVLRVYA YCCAACGFDG RIGTIPVGVE AAHVRWHSQH GPDDLANGVA LCSLHHTLFD LGVLGLTPDR ELKVSDLYVA RSPAGQAVYA LAGRPLAVPL PGQPAVDACH IAWHDRQVFR GVAA
|
| |