Gene Franean1_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2760 
Symbol 
ID5671149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3267244 
End bp3268158 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID641241669 
Productrestriction endonuclease-like protein 
Protein accessionYP_001507089 
Protein GI158314581 
COG category[V] Defense mechanisms 
COG ID[COG3440] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCG CCGAGCTGCT TGATCGGTTA GGTCGGTTGC GGCGGGCCCA GGTCGGCGCG 
GTCCGGGTGC CTCACAACCC GCTGCTGCTG TTGTGGCTGT TCGGCCGGCT GGCCGCGACA
GGCACCAGCG AGGTGAGCTA TGCGGAGGCG GAGCAGCCGG TCAGCGGGTT GATCAACCAG
TTCGGTCCGC CGGTGCGACG GTCAACGGCA CGGCAGCGGG CCGCGATGCC GTTCGTGCAC
CTGGAACGCG AACTGTGGGA CCTGCGTGAC GCCGCCGGTG GGCCCCTTGG CCCAGACCTG
CCGGAGCGAA GCCGCCTGCT TCACGACCTC GGTGCCGTGG GCCGCCTGCA CCGCCCCGTC
GAGCGGGCGC TCCTCGATCC CGGAATGCTT GTCGCCGCCG CGAGGCTGCT GTTGGACCGG
CATTTCACGC CCGCGCTCGC ACCGTTGATC TGCGATGTCG CCGGTCTTGA CCTCGGTACG
TGGGCCGACT CCACCGGTAT AGCCGGTGGG GATCGGCTTC GGCGACGGCG GAGTGCCACG
TTCGCCGAGC AGGTGCTGCG GGTCTACGCC TACTGCTGCG CGGCCTGTGG CTTCGATGGA
CGAATCGGGA CAATTCCGGT CGGGGTCGAG GCGGCCCACG TCCGCTGGCA TAGCCAGCAC
GGCCCGGACG ACCTCGCTAA CGGCGTGGCG TTGTGCTCGC TTCATCACAC GCTGTTCGAC
CTGGGTGTTC TCGGGTTGAC GCCGGACCGG GAACTCAAGG TTTCCGATCT CTACGTCGCT
CGGTCGCCGG CCGGACAGGC TGTCTACGCG CTGGCCGGGC GTCCGCTCGC GGTGCCTCTG
CCGGGTCAAC CCGCTGTCGA CGCCTGCCAC ATCGCCTGGC ATGACCGCCA GGTCTTCCGC
GGTGTAGCGG CATGA
 
Protein sequence
MDSAELLDRL GRLRRAQVGA VRVPHNPLLL LWLFGRLAAT GTSEVSYAEA EQPVSGLINQ 
FGPPVRRSTA RQRAAMPFVH LERELWDLRD AAGGPLGPDL PERSRLLHDL GAVGRLHRPV
ERALLDPGML VAAARLLLDR HFTPALAPLI CDVAGLDLGT WADSTGIAGG DRLRRRRSAT
FAEQVLRVYA YCCAACGFDG RIGTIPVGVE AAHVRWHSQH GPDDLANGVA LCSLHHTLFD
LGVLGLTPDR ELKVSDLYVA RSPAGQAVYA LAGRPLAVPL PGQPAVDACH IAWHDRQVFR
GVAA