Gene Franean1_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2705 
Symbol 
ID5671096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3200893 
End bp3201681 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID641241617 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001507037 
Protein GI158314529 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAGC GCGAGGACCC GAGTAGCCCG CTACTCATCG AGACCCGCGG CGCCGTGCGA 
GTCGTGACCT TGAACCGCCC GGGCGCCTTC AACGCGGTCG ACGAGGCGCT TCACCGTGCG
CTCGCGGACC TGTGGCCGGC GCTCGACGCG GCCGAGGACA TCCGCGCCGT CGTCCTCACC
GGTGCGGGCG ACGCCTTCTC GGCCGGCGGC GATCTCGGCC TCCTCGACCG GATGACCCGC
GACGCCAGGC TGAGGGCCGA CGTGATGCGG GAGGCCGCGG ACATCGTCCG GGGGATCACG
TCTGTCCGTG TTCCCATCGT CACCGCCGTC AACGGCGCGG CGGTGGGGCT CGGGTGCAGC
CTCGCCGCGA TGAGTGACCT GGTCGTCGTC GAGGAGCAGG CGTACTTCGC CGATCCGCAC
GTGATGTTGG GGTTGGTCGC CGCAGACGGC GGTGCGCTGA CCTGGCCCCT GCTGATCAGC
CTGCTTCGTG CCAAGGAGTT CATCCTGCTG GGCGAGCGCA TCCCGGCCGA GGAGGCACTG
CGGCTGGGGC TGGCCAACCG GGTGGTCCCC CGCGGCACCG CGCGCGCCAC CGCGCTCGAG
CTCGCGACCC GCCTGGCCGC GCTGCCGCCC CAGGCGGTGA CCGAGAGCAA GGCGCTGCTC
AACGCCGGCG TCCGGCAGGC GGTCGAGTCG CTGCTGAAGA CCGGCCTCGA CAGCGAGTCC
GCGTCTTTCG AGGAGCCGGC GTTCCAGCGC AACCTCGCCA GGATGCTCAG CCGGACGGGA
TCGGCCTGA
 
Protein sequence
MVEREDPSSP LLIETRGAVR VVTLNRPGAF NAVDEALHRA LADLWPALDA AEDIRAVVLT 
GAGDAFSAGG DLGLLDRMTR DARLRADVMR EAADIVRGIT SVRVPIVTAV NGAAVGLGCS
LAAMSDLVVV EEQAYFADPH VMLGLVAADG GALTWPLLIS LLRAKEFILL GERIPAEEAL
RLGLANRVVP RGTARATALE LATRLAALPP QAVTESKALL NAGVRQAVES LLKTGLDSES
ASFEEPAFQR NLARMLSRTG SA