Gene Franean1_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2624 
Symbol 
ID5671018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3106342 
End bp3106719 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content63% 
IMG OID641241540 
Producthypothetical protein 
Protein accessionYP_001506960 
Protein GI158314452 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAG TTCAAGGCCG CGACGACGGA TATGGTGGGA TCGGCGGACT CGGCTACGTC 
GAACTTCTCT TCCAGGTCCT CACTGAACGT GAAGAGAAAG TCTCAGTCGC GATCGCCTCG
AACGAAAGCT TCGGCGGATG GACCAAGACG TTCACCGACC CGCGTCTCTG CGCAGCCATC
GTCGACCGAC TCATCTTCGG CGGGAACATC ATCGAAACCG GCACCGACTC CTACCGCCTC
CGCAGACCCA CGCCCGCGCC ACAGGGCCCG GCTGATCAAC ACCCCGAGAC TGACACGGAG
GGCTACGCCT CTGCTACCGT AGTTGGCATG AAGCGCGCTG CCAGGATGAC GACGCCGGAG
AGTGTCCCGG CGCGCTGA
 
Protein sequence
MRKVQGRDDG YGGIGGLGYV ELLFQVLTER EEKVSVAIAS NESFGGWTKT FTDPRLCAAI 
VDRLIFGGNI IETGTDSYRL RRPTPAPQGP ADQHPETDTE GYASATVVGM KRAARMTTPE
SVPAR