| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2616 |
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| Symbol | |
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| ID | 5671010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3096138 |
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| End bp | 3097856 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241532 |
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| Product | integrase family protein |
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| Protein accession | YP_001506952 |
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| Protein GI | 158314444 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTACGT GCTCGGGTTG GCCCGTCTGC CCGAGCGGAA GGCCGACCTT CTCGCCGTCG
TCCGCACACT GTGGATCTAC CGGGAGTGTG TTCCGGTCGA GTGCCGACTC GGTGGCTACC
CGTGGGCGGG CACGGCCGCC AGGGATCTGG TGCGCATGCC ACCGGCGGGC CGGGAGAACA
AGACCCCCGC GGATCGCGGC GCCGACGATG GAAGCGCTGC TGGGCTGGGC GCTGACCATG
GTCGAGACGA TCGGGCCGGA CATCCGCGAC GCCTGGAAGG AGCTGGCCCG GCTCGAGGCC
GGCACCCACC CGTCCCAGCG GATCTACGAC GGGCTGAGTG TGCCCGCCCG GCTCGACCTG
TTCGTCCGGC GGGCCGCCGA GAACGGAACC CCGCTCCCCG GACGCAGCAC CGCAGGCAAG
GCCGTCGCCG TCAACGGTGC CCACGTTCTC CGCCTCGTCG GCGTCCCACC GGACAAACGA
TTCGGCCTGC CGCCACAGCA GCGCGCTCTG CTGGAGGAGT CCGGACTCCC GGTGGCGACC
AACACCTACA TCGGTACGAT CACAGGACAC ATCGACCGCG TTCCCTGGCG GGCCGAGCCC
ATCAGCGTCC CGGAGCTACC CACCATGATC AGGATGCTTT ACGCGTCTGC GTTCGTGGTC
ATCTGCTACC TGTCCGGCAT GCGGCCCGGC GAGGTTCTCA ACCTGCCCCA CGGCTGCCGC
GACAGCGACC CCCGCACCGG CGAACTGCTG CTACGCGGCC GGCGCGGCAA AGGCTACGAC
CGCGGCCCAC TGACCCGACA CGCAGAACCC GGCCGACCGT GGGTCGTCGT CACACCGGTC
CACAGCGCCG TCGAGATGCT GGAGAACCTG GCTGATTTCC CGTTCCTGTT CCCGGCAAGC
CCGATCATGG CCCACGCCCA TCGGGCGAAC ACGACCCACG CCCGCTCCAC CGGGGCGATC
AACCGGGATC TGGAAGACCT CACCACCTGG ATCAACACCA CGTTCGCCCG CCCCGACGGC
GACGCGCCGA TCCCACCGGA CCCGACCAAG CACCTGCACG CAGCCCGGTT CCGGCGGACG
CTGGCCTATT TCATCGTGCG CCGGCCCCGT GGCCTCGTCG CGGCGGCGCT CCAGTACGGA
CATCTCCATA CCAAGGTCAC CCTCAACTAC GCCGGTGACG CGGACACGTC CTGGCTCGAC
GATCTCCCCG TCGAACGCCT GGAGATGATC CTCGAACAGG TCGACACAGA TGCCCGGCTC
CTCGAGAACG ACGAGCACGT CAGCGGCCCC GCCGCCGCCG ACTACCACGC CCGCATCACC
CGGGCAGCAC GGTTCTCCGG CCGCGTCGTC AACCAGACCC GCAACGCCCA GCGGCTCCTC
GCCAGCCTCG ACCCGGACAT CCACCACGGC GACGGCATCA CCTGCGTCTA CCGCGCCGAA
ACAGCCGAAT GCCGGCGCAT CCTCGCCAGC CAGGGACTCG CCGCCGACAG CCCGCGAGAA
TCCGAGTGCC GATCCTCCTG CACCAACCTC GCTTTCACCG ACCGGGCGGT TGACCAGCTC
CATGCCCGGC TCACCCACCT CGACGCCACC GCCGATCACT CCCTGACGCC GCAACCGCTC
CGCGACCGCG CCCAAGCCCA GGCGAACGCC ACGAGAGCCG TCATCGACCG ACACGTCGCG
TCGTCCAGCC ACCTGACAGA ACCGGCAGGA CAACGATGA
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| Protein sequence | MPTCSGWPVC PSGRPTFSPS SAHCGSTGSV FRSSADSVAT RGRARPPGIW CACHRRAGRT
RPPRIAAPTM EALLGWALTM VETIGPDIRD AWKELARLEA GTHPSQRIYD GLSVPARLDL
FVRRAAENGT PLPGRSTAGK AVAVNGAHVL RLVGVPPDKR FGLPPQQRAL LEESGLPVAT
NTYIGTITGH IDRVPWRAEP ISVPELPTMI RMLYASAFVV ICYLSGMRPG EVLNLPHGCR
DSDPRTGELL LRGRRGKGYD RGPLTRHAEP GRPWVVVTPV HSAVEMLENL ADFPFLFPAS
PIMAHAHRAN TTHARSTGAI NRDLEDLTTW INTTFARPDG DAPIPPDPTK HLHAARFRRT
LAYFIVRRPR GLVAAALQYG HLHTKVTLNY AGDADTSWLD DLPVERLEMI LEQVDTDARL
LENDEHVSGP AAADYHARIT RAARFSGRVV NQTRNAQRLL ASLDPDIHHG DGITCVYRAE
TAECRRILAS QGLAADSPRE SECRSSCTNL AFTDRAVDQL HARLTHLDAT ADHSLTPQPL
RDRAQAQANA TRAVIDRHVA SSSHLTEPAG QR
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