Gene Franean1_2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2614 
Symbol 
ID5671008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3095144 
End bp3095659 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content65% 
IMG OID641241530 
ProductNUDIX hydrolase 
Protein accessionYP_001506950 
Protein GI158314442 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCGC GCTACCGCAG CATCGTCGAC GTCTACGTCC TGCTCCAACG CGACGGGAAG 
ATCCTCCTCA CTGAGCGCGC CAACACCGGC TACGCCGACG GCCAGCTCTG CCCACCCAGC
GGACACCTCG AACAGGGCGA GTCCGTGATC GACGGAGCCA TCCGCGAAGC CGCCGAGGAA
GTCGGCGTCA TCCTCACACC AGATGACCTG CACTGCGCAC ATGTGGTGCA TCACCGCAAC
TCCGACGGAC AGGGCCGCAT CGGTTTCTTC TTCGCGGCCA CACGCTGGCG AGGAGAACCG
GAAAACCGTG AGCCCCACAA ATGCGCGGGC CTCCACTGGG CCGACCCCGA TGATCTGCCA
TCCAACACAG TCGGCTACAC GGCCGCGGCA GTAGCGCAGA TCCAGGCCGG ACGCGGATTC
TCCATCCACG GCTGGGATAC CGCTTCCAAC AGCGGATGGA AGAATGCCGG TACCGGACCA
CGTGCCTTGA CGGACTTGAG CGCCAGGTGC ACATAG
 
Protein sequence
MPARYRSIVD VYVLLQRDGK ILLTERANTG YADGQLCPPS GHLEQGESVI DGAIREAAEE 
VGVILTPDDL HCAHVVHHRN SDGQGRIGFF FAATRWRGEP ENREPHKCAG LHWADPDDLP
SNTVGYTAAA VAQIQAGRGF SIHGWDTASN SGWKNAGTGP RALTDLSARC T