Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2614 |
Symbol | |
ID | 5671008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3095144 |
End bp | 3095659 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641241530 |
Product | NUDIX hydrolase |
Protein accession | YP_001506950 |
Protein GI | 158314442 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCGCGC GCTACCGCAG CATCGTCGAC GTCTACGTCC TGCTCCAACG CGACGGGAAG ATCCTCCTCA CTGAGCGCGC CAACACCGGC TACGCCGACG GCCAGCTCTG CCCACCCAGC GGACACCTCG AACAGGGCGA GTCCGTGATC GACGGAGCCA TCCGCGAAGC CGCCGAGGAA GTCGGCGTCA TCCTCACACC AGATGACCTG CACTGCGCAC ATGTGGTGCA TCACCGCAAC TCCGACGGAC AGGGCCGCAT CGGTTTCTTC TTCGCGGCCA CACGCTGGCG AGGAGAACCG GAAAACCGTG AGCCCCACAA ATGCGCGGGC CTCCACTGGG CCGACCCCGA TGATCTGCCA TCCAACACAG TCGGCTACAC GGCCGCGGCA GTAGCGCAGA TCCAGGCCGG ACGCGGATTC TCCATCCACG GCTGGGATAC CGCTTCCAAC AGCGGATGGA AGAATGCCGG TACCGGACCA CGTGCCTTGA CGGACTTGAG CGCCAGGTGC ACATAG
|
Protein sequence | MPARYRSIVD VYVLLQRDGK ILLTERANTG YADGQLCPPS GHLEQGESVI DGAIREAAEE VGVILTPDDL HCAHVVHHRN SDGQGRIGFF FAATRWRGEP ENREPHKCAG LHWADPDDLP SNTVGYTAAA VAQIQAGRGF SIHGWDTASN SGWKNAGTGP RALTDLSARC T
|
| |