| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2516 |
|---|
| Symbol | |
|---|
| ID | 5670912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2995552 |
|---|
| End bp | 2996532 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641241433 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506854 |
|---|
| Protein GI | 158314346 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTT CCACCCATGA CGCGCCGGCA ACGGCAACCC CGTCGGTAAC GGCAACGCCG
CCGGCGCCGG ACGTGGCCCC CGGGGCGTCC GACGGCGAGC GGAAGAGCCC GTGGGCCGGG
CTGGTCGCGC CGGCCGAGGG CGGGGAGTGG CCTCGCCCGG TGCCGGTCAG GACGGTCAAG
GAGGAGCGGC TGCACCGCAA GCGGAAACTC GCCGCCGCCT ACCGGCTCTT CGCCAAGCTC
GGCATCGCCG AGGGACTGGC CGGCCACATC AGCGCCCGCG ACCCCGAGCT GACCGACCAT
TTCTGGGTCA ACCGGCTCGG CCTCGACTTC GGCAGGATCA AGGTCTCCAA CCTGCTGCTG
GTCGACGACA AAGGGGAGAT CGTCGAGGGT AAGCCGCCGC TGAACAGGGC GGCGTTCACC
ATCCATTCGC AAATCCACGC CGCCCGGCCG GACGTTGTCG GTGCCGCGCA CACCCATGCC
CTGTACGGAC GGGCACTCGC CGCGATCGGC GAGCCGCTGC ATCCGATCTC CCAGGACTCC
CTCGCGTTCT ACCAGGACCA CGTGATCTTC GACGAGTACA ACGGGGTCGT GCTGGACGAG
GAGGAGGGCC GGAAGATCGC CGCCGCGCTC GGCCCGCACA AGTTGGCGAT CCTGCGCAAC
CACGGCCTGC TCACCGTCGG CACCAGCGTC GAGGCGGCGG CGTACTGGTA CATCGCCGCG
GGCGGGCGGC GAGGACGCAG CTCGTCGCGG CGGCGGCCGG GACGCTGCGC CTCCTGGACC
ACGAGATCGC CAGCGCCACC GCCAGTCAGG CGCGAGGTGA CGAGGGCGCC CGCTGGTCCT
TCGAGGCTCT CTACGAGATC ATCGTCGAGG AACAGCCCGA CCTGCTCGAC TAGCCCGACC
AGCCCGACCT CGACTAGCTC GCTGGAAGGG TGCCGCCCCG GCCCGGTCGG GGGATCAGCG
GGGGCGACGC GTCGACGGTG A
|
|---|
| Protein sequence | MTLSTHDAPA TATPSVTATP PAPDVAPGAS DGERKSPWAG LVAPAEGGEW PRPVPVRTVK
EERLHRKRKL AAAYRLFAKL GIAEGLAGHI SARDPELTDH FWVNRLGLDF GRIKVSNLLL
VDDKGEIVEG KPPLNRAAFT IHSQIHAARP DVVGAAHTHA LYGRALAAIG EPLHPISQDS
LAFYQDHVIF DEYNGVVLDE EEGRKIAAAL GPHKLAILRN HGLLTVGTSV EAAAYWYIAA
GGRRGRSSSR RRPGRCASWT TRSPAPPPVR REVTRAPAGP SRLSTRSSSR NSPTCSTSPT
SPTSTSSLEG CRPGPVGGSA GATRRR
|
|---|
| |