Gene Franean1_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2495 
Symbol 
ID5670891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2972366 
End bp2973214 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content76% 
IMG OID641241412 
Productsilent information regulator protein Sir2 
Protein accessionYP_001506833 
Protein GI158314325 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.479866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTCG CCCGGTTGCG TGATCTTGTC GCCGGCGGTG GCGTCGCGGT GCTCACCGGA 
GCGGGGATGT CGACCGACTC GGGAATCCCT GACTATCGGG GGCCGAACGG CTCGCTGCGC
CAGCACACGC CGATGACCTA CCAGCAGTTC AACCGGGACC AGGCGGCCCG GCGCCGGTAC
TGGGCGCGCA GCCACCTCGG CTGGCGCCAC GTCGCCGGGG CGCGCCCCAA CACCGGGCAC
CGCGCTCTGG CGGAACTGGA GGCCGCGGGC CTGCTCGACG GCGTCATCAC CCAGAACGTC
GACGGGCTGC ACCGGGCCGC CGGGTCGCTC CGGGTCATCG ACCTGCACGG CGAGCTCGCC
CGGGTCCGCT GCCGGGCCTG CGGGGCGCTC AGCGCGCGGG CCGAGCTCGA CCGCCGCCTG
CGCGCGGCGA ACCCGGGCTT CGCTGCCGGG GTGGCCGCCG CGTCGCCGCT CGGCGCCGAG
GTCAATCCGG ACGGCGACGT CACCCTCCCC GACGAGGCGA TCGACGGTTT CGTCGTAGTG
GGGTGCACCG GCTGCGGGGG CGACCTGGAG CCCGACGTGG TCTTCTTCGG CGCCACGGTG
CCGCCGGCGC GGCTGGCGTC CGCGGTCGCG CTGGTCGAGA ACGCCCGCGG GCTGCTCGTG
CTCGGCTCGT CGCTGGCCGT CATGTCGGGC TACCGGTTCG TACTGCGGGC GGGAGAGCTC
GGCATCCCGG TCGGGATCGT GAACCAGGGC CCGACCCGCG GCGACGCGCG GGCGGAGTTC
ACCGTCGACT CGCCACTGGG CGCCGTCCTG CCCCGCCTCG CCGCCGAGCT GCTCGGCGCG
GCCGCCTGA
 
Protein sequence
MVFARLRDLV AGGGVAVLTG AGMSTDSGIP DYRGPNGSLR QHTPMTYQQF NRDQAARRRY 
WARSHLGWRH VAGARPNTGH RALAELEAAG LLDGVITQNV DGLHRAAGSL RVIDLHGELA
RVRCRACGAL SARAELDRRL RAANPGFAAG VAAASPLGAE VNPDGDVTLP DEAIDGFVVV
GCTGCGGDLE PDVVFFGATV PPARLASAVA LVENARGLLV LGSSLAVMSG YRFVLRAGEL
GIPVGIVNQG PTRGDARAEF TVDSPLGAVL PRLAAELLGA AA