| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2492 |
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| Symbol | |
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| ID | 5670888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2969090 |
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| End bp | 2970880 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641241409 |
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| Product | hydrogen:quinone oxidoreductase |
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| Protein accession | YP_001506830 |
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| Protein GI | 158314322 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.44509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA CCTCGGAGCA CAGGGGAACC GATGCCCGAG GCGCCAGCCT GCTGGAGATG
TCCTGGGACC CGATCACCCG GATCGTCGGA AGCCTCGGCG TCTACACGAA GATCGACTGG
CCGGCGCGCA GGGTGGTCGA GTGCCACAGC ACGTCATCCA TCTTCCGCGG CTACAGCATC
TTCATGAAGG ACAAGGACCC CCGCGACGCC CATTTCATCA CCAGCCGGAT CTGCGGCATC
TGCGGTGACA ACCACGCCAC CTGCTCGGTG TACGCGCAGA ACATGGCGTA CGGCGTCAAG
CCGCCGCCGC TCGCCGAATG GATCATCAAT CTGGGCGAGG CCGCCGAGTA CATGTTCGAC
CACTGCATCT ACCAGGAGAA CCTGGTGGGG GTCGACTACT GCGAGAAGAT GGTCGGCGAG
ACCAATCCTG AGGTACTCGA GCTGGCCTGG GCCACCGAGT CGCCGCACGC CGACGAGCAC
GGGTACCGGA CCATCGGCGA CATCATGCAC GCCCTCAACC CGATCGAGGG CGAGTTCTAC
CGCGAGGCGC TGGGGATGAG CCGGCTCACC CGCGAGATGT TCTGCCTGAT GGAGGGGCGG
CACGTCCATC CATCCACGCT CTACCCGGGT GGCGTGGGCA CGGTGGCCTC CGTCCAGCTG
TTCACGGACT ACCTCACCCG GCTGATGCGC TACATCGAGT TCCTCAAGCG CGTCGTCCCG
ATGCACGACG ATCTCTTCGA CTTCTTCTAC AAGGCGCTGC CCGGCTACGA GGAGGTCGGC
CGGCGGCGGA TCCTGCTCGG CTGCTGGGGA GCGTTCAACG AGCCGGAGCG GTGCGACTTC
ACCTACCGGA ACATGGCCGA CTGGGGCCGG AGCATGTTCG TCACCCCGGG GGTGGTCGTC
GACGGCAACC TGGTCACGAA CAACCTCGTC GACATCAACC TCGGCATCCG CGTCCTGCTG
GGCAGTTCGT ACTACGACGA CTGGGACGAC CAGCCGCTGT TCGTCACCCA CGACCCGCTG
GGGAACCCGG TCGACCGGCG GCACCCGTGG AACCAGACCA CCATCCCCCA CCCGAGCCGG
CGCGACTTCG ACGACAAGTA CTCGTGGGTG ATGTCGCCGC GCTGGTTCGA CGGCATCGAC
CACCTGCCGC TCGACACCGG CGGCGGTCCG ATCGCCCGGC TGTGGAGCAC GGCCCTGTCC
GGGCTGGTCG ACATCGGCCA CGTCCGCGCG ACCGGGCACA GCGTGCGGAT CACGCTGCCG
AGGTCGGCGA CGGTCGGCGA GCGGACCTAC GAGTGGACGA TCCCCCGCTG GAGCAACACC
CTGGAGCGCA ACCGCGCCCG CACCTACTTC CAGGCGTACG CGGCGGCCTG CGCGCTGTAC
TTCGCCGAGC AGGCGCTGGC CGAGGTCCGG GCGGGCCACT CGAAGACGTG GGAGTCCTTC
GACGTCCCCG ACGAGGCCGT GAGCTGCGGG TTCACCGAGG CCGTCCGCGG GGTGCTGTCG
CACCACATGA TCATCCGGGA CGGCCGGATC GCGAACTACC ACCCGTACCC GCCGACGCCG
TGGAACGCCA GCGTGCGCGA CGTGTTCGGC ACGCCCGGCC CGTACGAGGA CGCGGTGCAG
AACACCCCGA TCTTCGAGCA GAACCCGCCG GAGTCGTTCA AGGGGATAGA CATCATGCGC
ACTGTCCGCA GCTTCGACCC GTGCCTGCCC TGCGGGGTGC ACATGCACAC CGGCGCCGGG
CGCACGCTGG ACGTCGTCCA CACCCCGCAC GCCTTCACCC CCGCCGGGTG A
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| Protein sequence | MTTTSEHRGT DARGASLLEM SWDPITRIVG SLGVYTKIDW PARRVVECHS TSSIFRGYSI
FMKDKDPRDA HFITSRICGI CGDNHATCSV YAQNMAYGVK PPPLAEWIIN LGEAAEYMFD
HCIYQENLVG VDYCEKMVGE TNPEVLELAW ATESPHADEH GYRTIGDIMH ALNPIEGEFY
REALGMSRLT REMFCLMEGR HVHPSTLYPG GVGTVASVQL FTDYLTRLMR YIEFLKRVVP
MHDDLFDFFY KALPGYEEVG RRRILLGCWG AFNEPERCDF TYRNMADWGR SMFVTPGVVV
DGNLVTNNLV DINLGIRVLL GSSYYDDWDD QPLFVTHDPL GNPVDRRHPW NQTTIPHPSR
RDFDDKYSWV MSPRWFDGID HLPLDTGGGP IARLWSTALS GLVDIGHVRA TGHSVRITLP
RSATVGERTY EWTIPRWSNT LERNRARTYF QAYAAACALY FAEQALAEVR AGHSKTWESF
DVPDEAVSCG FTEAVRGVLS HHMIIRDGRI ANYHPYPPTP WNASVRDVFG TPGPYEDAVQ
NTPIFEQNPP ESFKGIDIMR TVRSFDPCLP CGVHMHTGAG RTLDVVHTPH AFTPAG
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