Gene Franean1_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2427 
Symbol 
ID5670823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2888675 
End bp2890585 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content74% 
IMG OID641241344 
Producthypothetical protein 
Protein accessionYP_001506765 
Protein GI158314257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.511382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.23616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC TCCTCCTCGG ACCCATGCAC CGGTATGCCG GCGACCGCCA CGTGTCCGTG 
TGGGTGGAGA CCGACGAGCC CTGCACCGTC GAGATCCGGT CCGGGCTCGG GCCACGCGCG
GCGGCGCCGA CCTTCGCCGT CGCCGGGCAC CACTACGCGC TGGTCGTGGT CGACGGCCTC
GAGCCGGGCA CGGCGTACCC GTACGAGGTC TGGCTCACTG CGGCGGGCGT GCCATCGCCC
GACCAGGCGG TGTGCGTCTG GCCCGAGGAG GGCAGCCCGC CCAGCCTGCT GCGGCCGGTG
GGTGGCGACC GTCCCGTCCG GCTGGTGTTC GGCTCGTGCC GGGTGACCGC GCCGCAGGAG
AAGCCGTACA CGCTGTCCCC CGGCGAGGAC CCGCGTGGCC TGGGCACCGA CGCGCTGCAC
GCCCTCGCCC TGCGCATGAC CGAGACCCCG CCGGACACCT GGCCCGACGC GCTGCTGCTC
CTCGGCGACC AGGTCTACGC GGACCACGTG TCGCCGGCGA CCGCGGGCCG CATCCGCGCC
CACCGTGACG TCACGGTGCC GCCCGGCGAG GAGATCGCGG ATTTCACGGA GTACGCCTGG
CTGTACCAGG AGGCCTGGTC ACAGCGGGAG ATCCGTTGGC TGCTCTCGAC CGTCCCGACC
GCGATGATCG CCGACGACCA CGACGTCCGC GACGACTGGA ACATCTCTGC CGCCTGGCGC
GCCGAGATCC GGTCGCAATC CTGGTGGGAC ACCCGGATCA CCAGCGGGAT CATGGCGTAC
TGGCTGTACC AGCACCTGGG CAACCTGGAT CCGCGGACGC TCGCCGACGA CCCGGTGTTC
ACCGCGGTCA CGGCGCTTGC CTCCGGCGGC GAGGACGGCG AGAACCTGCT GCGCATCTTC
GCCCGGCGGG TCGACCGGAT GCCGGACCTC GGAGCACTCG CGTCCGGCCA GGACCACGAC
ACCAGCACCG CGGTCGGCGG CCACGCCGGC GCCGGCCACG ACACCGGTGA CCTGGCCGGC
GAGCGTCCCC CGACGCCGCC GCGCTGGAGC TACCGGTGGG ACCTCGGCCG CACCCGATTG
ATCGTCATCG ACTCCCGCTT CGCCCGCGTC GTCGCCCCCG ACGGGACCCG CGCCATGGTG
CACGACGCCG ACTGGTCCTG GATCCGGGAG CAGACCCGGC ACACCGGCGA AGTCGATCAC
CTCCTGCTCG GGACGTCCGT GCCGTACCTG CTCACCCCGA CGATCCACAA CGTCGAGGCG
GTGAGCGAGC GGCTGGCCTC AGGCCGCTTC GGACGGGTCG CGGCCGCTGG GGCGGAACGC
CTGCGGCAGG CGCTCGACCT CGAGCACTGG GCCGCGTTCA GCCACTCCTT CATCCGGATG
ACCCAGCTGC TCGGCCAGGT CTCGACCGGT GAGCACGGCC CGGCTCCCGC GAGCGTCGTC
GTGCTGTCCG GGGACGTCCA CCACGCCTAT CTGGCCAGGG CGGAACCCGC CCGCGATCCG
GTCGCGGCGA GTCGGGCACC GGCCGACCCA GCCGCCGGTA CGCACCTCAC CGCAAGCCAT
GCCGGCACGA CCGGCACCGC CACCGGCAGC GCCATCAGCG CCGCCGGTGG CGAGTCGGCG
GTGTGGCAGG CGGTGTGCTC GCCGTTCCGC AACCCACTCG GCCCCGGTAT CCGCCGGATC
GACGCGCTCT CCCGGCGCCG CCCGCTCGCC GCCGTCTCCA GCCGGGTCGC CCGCCTGCTC
GGCATGCGGG GGCAGCCCGT GCGGTGGAAG GTCACCCACG GGCCGTGGTT CGACAGCCAG
CTGGCCACCC TCGTGCTCGA CGGCCGGCAC GCGACCATGC TCCTGGAGAA GACCGAGCCG
GACGGCGAAC CGGGCGGCCT GGACGAGGTC ATGCGCGCGA CGCTCAGCTG A
 
Protein sequence
MTSLLLGPMH RYAGDRHVSV WVETDEPCTV EIRSGLGPRA AAPTFAVAGH HYALVVVDGL 
EPGTAYPYEV WLTAAGVPSP DQAVCVWPEE GSPPSLLRPV GGDRPVRLVF GSCRVTAPQE
KPYTLSPGED PRGLGTDALH ALALRMTETP PDTWPDALLL LGDQVYADHV SPATAGRIRA
HRDVTVPPGE EIADFTEYAW LYQEAWSQRE IRWLLSTVPT AMIADDHDVR DDWNISAAWR
AEIRSQSWWD TRITSGIMAY WLYQHLGNLD PRTLADDPVF TAVTALASGG EDGENLLRIF
ARRVDRMPDL GALASGQDHD TSTAVGGHAG AGHDTGDLAG ERPPTPPRWS YRWDLGRTRL
IVIDSRFARV VAPDGTRAMV HDADWSWIRE QTRHTGEVDH LLLGTSVPYL LTPTIHNVEA
VSERLASGRF GRVAAAGAER LRQALDLEHW AAFSHSFIRM TQLLGQVSTG EHGPAPASVV
VLSGDVHHAY LARAEPARDP VAASRAPADP AAGTHLTASH AGTTGTATGS AISAAGGESA
VWQAVCSPFR NPLGPGIRRI DALSRRRPLA AVSSRVARLL GMRGQPVRWK VTHGPWFDSQ
LATLVLDGRH ATMLLEKTEP DGEPGGLDEV MRATLS