Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2427 |
Symbol | |
ID | 5670823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2888675 |
End bp | 2890585 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641241344 |
Product | hypothetical protein |
Protein accession | YP_001506765 |
Protein GI | 158314257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.511382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.23616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC TCCTCCTCGG ACCCATGCAC CGGTATGCCG GCGACCGCCA CGTGTCCGTG TGGGTGGAGA CCGACGAGCC CTGCACCGTC GAGATCCGGT CCGGGCTCGG GCCACGCGCG GCGGCGCCGA CCTTCGCCGT CGCCGGGCAC CACTACGCGC TGGTCGTGGT CGACGGCCTC GAGCCGGGCA CGGCGTACCC GTACGAGGTC TGGCTCACTG CGGCGGGCGT GCCATCGCCC GACCAGGCGG TGTGCGTCTG GCCCGAGGAG GGCAGCCCGC CCAGCCTGCT GCGGCCGGTG GGTGGCGACC GTCCCGTCCG GCTGGTGTTC GGCTCGTGCC GGGTGACCGC GCCGCAGGAG AAGCCGTACA CGCTGTCCCC CGGCGAGGAC CCGCGTGGCC TGGGCACCGA CGCGCTGCAC GCCCTCGCCC TGCGCATGAC CGAGACCCCG CCGGACACCT GGCCCGACGC GCTGCTGCTC CTCGGCGACC AGGTCTACGC GGACCACGTG TCGCCGGCGA CCGCGGGCCG CATCCGCGCC CACCGTGACG TCACGGTGCC GCCCGGCGAG GAGATCGCGG ATTTCACGGA GTACGCCTGG CTGTACCAGG AGGCCTGGTC ACAGCGGGAG ATCCGTTGGC TGCTCTCGAC CGTCCCGACC GCGATGATCG CCGACGACCA CGACGTCCGC GACGACTGGA ACATCTCTGC CGCCTGGCGC GCCGAGATCC GGTCGCAATC CTGGTGGGAC ACCCGGATCA CCAGCGGGAT CATGGCGTAC TGGCTGTACC AGCACCTGGG CAACCTGGAT CCGCGGACGC TCGCCGACGA CCCGGTGTTC ACCGCGGTCA CGGCGCTTGC CTCCGGCGGC GAGGACGGCG AGAACCTGCT GCGCATCTTC GCCCGGCGGG TCGACCGGAT GCCGGACCTC GGAGCACTCG CGTCCGGCCA GGACCACGAC ACCAGCACCG CGGTCGGCGG CCACGCCGGC GCCGGCCACG ACACCGGTGA CCTGGCCGGC GAGCGTCCCC CGACGCCGCC GCGCTGGAGC TACCGGTGGG ACCTCGGCCG CACCCGATTG ATCGTCATCG ACTCCCGCTT CGCCCGCGTC GTCGCCCCCG ACGGGACCCG CGCCATGGTG CACGACGCCG ACTGGTCCTG GATCCGGGAG CAGACCCGGC ACACCGGCGA AGTCGATCAC CTCCTGCTCG GGACGTCCGT GCCGTACCTG CTCACCCCGA CGATCCACAA CGTCGAGGCG GTGAGCGAGC GGCTGGCCTC AGGCCGCTTC GGACGGGTCG CGGCCGCTGG GGCGGAACGC CTGCGGCAGG CGCTCGACCT CGAGCACTGG GCCGCGTTCA GCCACTCCTT CATCCGGATG ACCCAGCTGC TCGGCCAGGT CTCGACCGGT GAGCACGGCC CGGCTCCCGC GAGCGTCGTC GTGCTGTCCG GGGACGTCCA CCACGCCTAT CTGGCCAGGG CGGAACCCGC CCGCGATCCG GTCGCGGCGA GTCGGGCACC GGCCGACCCA GCCGCCGGTA CGCACCTCAC CGCAAGCCAT GCCGGCACGA CCGGCACCGC CACCGGCAGC GCCATCAGCG CCGCCGGTGG CGAGTCGGCG GTGTGGCAGG CGGTGTGCTC GCCGTTCCGC AACCCACTCG GCCCCGGTAT CCGCCGGATC GACGCGCTCT CCCGGCGCCG CCCGCTCGCC GCCGTCTCCA GCCGGGTCGC CCGCCTGCTC GGCATGCGGG GGCAGCCCGT GCGGTGGAAG GTCACCCACG GGCCGTGGTT CGACAGCCAG CTGGCCACCC TCGTGCTCGA CGGCCGGCAC GCGACCATGC TCCTGGAGAA GACCGAGCCG GACGGCGAAC CGGGCGGCCT GGACGAGGTC ATGCGCGCGA CGCTCAGCTG A
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Protein sequence | MTSLLLGPMH RYAGDRHVSV WVETDEPCTV EIRSGLGPRA AAPTFAVAGH HYALVVVDGL EPGTAYPYEV WLTAAGVPSP DQAVCVWPEE GSPPSLLRPV GGDRPVRLVF GSCRVTAPQE KPYTLSPGED PRGLGTDALH ALALRMTETP PDTWPDALLL LGDQVYADHV SPATAGRIRA HRDVTVPPGE EIADFTEYAW LYQEAWSQRE IRWLLSTVPT AMIADDHDVR DDWNISAAWR AEIRSQSWWD TRITSGIMAY WLYQHLGNLD PRTLADDPVF TAVTALASGG EDGENLLRIF ARRVDRMPDL GALASGQDHD TSTAVGGHAG AGHDTGDLAG ERPPTPPRWS YRWDLGRTRL IVIDSRFARV VAPDGTRAMV HDADWSWIRE QTRHTGEVDH LLLGTSVPYL LTPTIHNVEA VSERLASGRF GRVAAAGAER LRQALDLEHW AAFSHSFIRM TQLLGQVSTG EHGPAPASVV VLSGDVHHAY LARAEPARDP VAASRAPADP AAGTHLTASH AGTTGTATGS AISAAGGESA VWQAVCSPFR NPLGPGIRRI DALSRRRPLA AVSSRVARLL GMRGQPVRWK VTHGPWFDSQ LATLVLDGRH ATMLLEKTEP DGEPGGLDEV MRATLS
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