Gene Franean1_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2418 
Symbol 
ID5670814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2875622 
End bp2876425 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID641241335 
Producthypothetical protein 
Protein accessionYP_001506756 
Protein GI158314248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.435152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.533481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGTC GCTATTCCTG GGGTGGCGCC CATCCGTCGG TCCGGTGGCT CAAGGAGGAG 
ATAACCCCGG CCCGGGACGA CGTTCTCACG CATGCCGTGT ACGGCCGCCT GGTGACGCCG
GACGACGTCA CGACCTTCAT GACCAGCCAC GTGTTCGCGG TCTGGGATTT CATGTCCCTG
CTGAAGACCC TGCAACGCAG GCTCACGTGT GTCGACGTGC CGTGGGTGCC GACCCCGCAC
CGGAACTGCC GCCGCCTGAT CAATGAGATC GTCCTCGTCG AGGAGAGCGA CGAGTACGGC
GACTCCTACA TCAGCCATTT CGAGCTGTAT CTCCAGGCGA TGACGGAGGC CGGGGCGGAC
ACCGGGCCCA TCGAGCGATT CCTCGCCGAG CTGGCCGCCG GTACCCCCGT GCCGGAGGCG
GTCTCCCGCG CGCGGGTGCC GGCGCCGGCC GCGCGGTTCG TACGCCTCAC CTGGGACCTG
CTGGGCTCCG CGCCGCTGCA CTCCCTGGCC GCCGCGTTCG CCTTCGGGCG CGAGGACCTG
ATACCGGAGA TGTTCACCCA GGTCCTCGAC GGCGACGTCG ACTTCTCGGC CTTCCGCGAC
TACCTGTCCC GGCATGTGGC CGTCGACGGG GAGCAGCACA CCCCCATGGC GATGGAGATG
CTCGTGGCCC TCGCCGGCGA CGACCGGGAG CGGTGGCAGG AGTGCGCGGC CGTGGTGCGG
GACTGCCTGC GGGCCCGTGC GGCGCTGTGG GACGGCATCG CCGCGTCACT CCCGAACCGG
CGTCCCGTCC AGCGGGTCTC CTGA
 
Protein sequence
MPSRYSWGGA HPSVRWLKEE ITPARDDVLT HAVYGRLVTP DDVTTFMTSH VFAVWDFMSL 
LKTLQRRLTC VDVPWVPTPH RNCRRLINEI VLVEESDEYG DSYISHFELY LQAMTEAGAD
TGPIERFLAE LAAGTPVPEA VSRARVPAPA ARFVRLTWDL LGSAPLHSLA AAFAFGREDL
IPEMFTQVLD GDVDFSAFRD YLSRHVAVDG EQHTPMAMEM LVALAGDDRE RWQECAAVVR
DCLRARAALW DGIAASLPNR RPVQRVS