Gene Franean1_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2400 
Symbol 
ID5670796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2853295 
End bp2853633 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content71% 
IMG OID641241317 
Productputative oxidoreductase 
Protein accessionYP_001506738 
Protein GI158314230 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.662767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCCAT CTCACTGTCC GCGAGAGCGG CCCGCGCAGG CGACGCACCT GGCCGTGCAC 
CTCCTCGACG TCGCCGACCG GGAGCTGTCG GAGCTGTTCG GCGAGCTCAC CGGCGACGAG
GTCGACAAGT TCGCCCGCTG TCGCTGGTCG GGTGGGCCTT TCGGGATGCC GGTGCTGGCG
GGCCCGCGTG CCTGGTTCGC CGGGCCCGTG ATGACCACCG CCGAGGTCGG TGACCACACG
GCGTTCGTGA TCGATCCGGT CGCGGGGAAG TTCCACGGTC CGCTGCGCCA GCTGGGGTTC
CAGGACGTGC GCGACATGGA ACCGGGCCAT CCCGCCTGA
 
Protein sequence
MGPSHCPRER PAQATHLAVH LLDVADRELS ELFGELTGDE VDKFARCRWS GGPFGMPVLA 
GPRAWFAGPV MTTAEVGDHT AFVIDPVAGK FHGPLRQLGF QDVRDMEPGH PA