Gene Franean1_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2398 
Symbol 
ID5670794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2851724 
End bp2852497 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content74% 
IMG OID641241315 
Productglutamine amidotransferase class-I 
Protein accessionYP_001506736 
Protein GI158314228 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCG AGAACACGCT GGGCTCCGAC AAGGCGATCC GGGCCGGCAC GCCGCCACGG 
GCGGTGGTGA TCGTGCACGA CGTCACGGAT GGTGCCGCCG TGGCCGAGAT CGGCAGCGTC
GGCGACCGGC TGCGCCACCA CGGCATCGAC TTCACCCTCG TCACCTCCGG CTCACCGCCG
CCCTCGCCGC GGTCGCTGGA CCTGGTCGTG GTCATGGGCT CGGACAAGTC CGCCTACGAC
GACACCGTGC CCTGGCTGTC GTCCGAGCTC GCCTACCTGC GGGCCGCGGT CGAGGCCGGG
ACACCGGTGC TCGGGATCTG TTTCGGCGGC CAGTTGCTCG CCCGCGCCCT CGGCGCCGCC
GTGCGGCAGG CGCCGCGCCC CGAGCTCGGC TGGCGCTCGG TGACGACAGC GGCGCCGGAT
CTCGTCCCCG CGGGCCCATG GCTCGAGTTC CACTTCGACA CCTTCGACGT CCCGCCTGGC
GCCGAGGAGA TCGCCTGGAC CGCGGACGCC CCGCAGGCGT TCCGCTCCGG GCCGCACCTG
GGCGTCCAGT TCCATCCCGA GATCACGCCG GCCAGTTTCG AGGGGTGGGT CCGCGGGTGG
CGGGAGCAGG GACTCGAGCC GTGGCTGCGC GGCCACGGCG TCGACGCCGC CGCCCTGCGC
GCCGAGATCG CCACCCGGGC CGACGAGGCG CGGCACCGCT CGGACGCCCT GTTCGACGCC
TTCTGGACGA GCGTCCGCAC CACAGCCGGC TCCAGACGGC TCCGGGCGAA GTGA
 
Protein sequence
MSVENTLGSD KAIRAGTPPR AVVIVHDVTD GAAVAEIGSV GDRLRHHGID FTLVTSGSPP 
PSPRSLDLVV VMGSDKSAYD DTVPWLSSEL AYLRAAVEAG TPVLGICFGG QLLARALGAA
VRQAPRPELG WRSVTTAAPD LVPAGPWLEF HFDTFDVPPG AEEIAWTADA PQAFRSGPHL
GVQFHPEITP ASFEGWVRGW REQGLEPWLR GHGVDAAALR AEIATRADEA RHRSDALFDA
FWTSVRTTAG SRRLRAK