| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2373 |
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| Symbol | |
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| ID | 5670769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2819179 |
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| End bp | 2820618 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641241290 |
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| Product | L-lysine aminotransferase |
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| Protein accession | YP_001506711 |
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| Protein GI | 158314203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00699] 4-aminobutyrate aminotransferase, eukaryotic type
[TIGR03251] L-lysine 6-transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.215522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCGTCA TGAGTGTCGC GGGCCGCCCG GGCGGGGGGA GCCGTGCCCG GCCCGAGCCG
GCCGAGGTGA TCCCGATATT GTCCCGGCAC GTCCTGACCG ACGGGTACGA CGTCGTCTGC
GACCTGACGG CCAGCACCGG CAGCACGATC GTCGACGCCC GCACCGGGAC GCGCTACCTC
GACCTCTACA GCTTCTTCGC CTCCGCGCCG CTCGGGATCA ACCCGCCGGC CCTGCTGGGC
GACCCGGAGT TCCTCACCGA GCTCGCCCGG GCGGCCGTCA ACAAGCCGGC GAACCCCGAC
ATGGCGACCG CCGCCTACGC CGAGTTCGTC GAGACCTTCG CGCGGGTGCT GGGCGACCCG
GAGCTGCCGC ACCTGTTCTT CGTCGAGGGC GGGTCGGCAG CCGTCGAGAA CGCCCTCAAG
TGCGCGTTCG ACTGGAAGAG CCGGCACAAC GAGGCACACG GGCGGCCCGC CGAGCTCGGC
GGGCGGGTGC TGCACCTGCG GTCGGCGTTC CACGGCCGCG GCGGGTACAC CCTCTCGGTG
ACCAACACCG AGCCGGTCAA GACCGCGCGC TTCCCGGTCT TCGACTGGCC CCGGGTCGAC
TGCCCGGCGG TGACCTTCCC CTGCACCGGC GCGGCGCTGG ACGCGGTGGT CGCCGCCGAG
CGGCGCGCGC TCGCGCAGGC CGAGGAGGCG TTCGCCCGCC ACCGCCACGA CATCGCATGC
TTCCTCGCCG AGCCGATCCA GGCCGAGGGC GGGGACAACC ACCTCCGCGG CGAGTTCCTG
CGCGCGATGG CGGCGCTGTG CGAGCGTCAC GACGCGCTGT TCGTCGTCGA CGAGGTGCAG
ACCGGGGTGG GCCTGACCGG CTCCGCCTGG GCGCACACCC AGCTCGGCCT GCGCCCCGAC
GTCGTCGCGT TCGGCAAGAA GGTCCAGCTC GGCGGGGTGA TGGCCGGGCG GCGGGTGGAC
GAGGTCGCCG ACAACGTCTT CCGGCTGCCC GGCCGGATCA GCTCCACCTG GGGCGGCGGG
CTCGTCGACA TGGTGCGTTC CCGGCGAATG CTGGAGATCA TGGAGTCGGA GCGGCTGTTC
GACCGGGCCG CCGTCCTGGG CTCCGATCTG CTGGCCGGAC TCGAGGAGCT GGCCCAGCGC
CACCCCCGCC TGCTGCGCAA CGCCCGCGGG CGTGGGTTGA TGTGCGCCGT GGACCTGCCC
GACCGTGCCC TGCGCGACGA GGTCGTCCGG CTGCTGCGGG AACGCGAGCA CGTCCTGCTG
CTGCCGGCGG GGGAGCGGGC GCTGCGCTTC CGCCCGGCGC TCACCATCGG CGCCGAGGAG
CTCGCCGCCG GGGTGCGCGC CCTCGACCGG GTGCTCACCC ACCTCGTTTC GCCGGAGCCC
GAGGCTGCTG AGAAGGCCTC GCCGCCGGCC ACCGCCACGC AGGAGAAAGG ACTGAGATGA
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| Protein sequence | MAVMSVAGRP GGGSRARPEP AEVIPILSRH VLTDGYDVVC DLTASTGSTI VDARTGTRYL
DLYSFFASAP LGINPPALLG DPEFLTELAR AAVNKPANPD MATAAYAEFV ETFARVLGDP
ELPHLFFVEG GSAAVENALK CAFDWKSRHN EAHGRPAELG GRVLHLRSAF HGRGGYTLSV
TNTEPVKTAR FPVFDWPRVD CPAVTFPCTG AALDAVVAAE RRALAQAEEA FARHRHDIAC
FLAEPIQAEG GDNHLRGEFL RAMAALCERH DALFVVDEVQ TGVGLTGSAW AHTQLGLRPD
VVAFGKKVQL GGVMAGRRVD EVADNVFRLP GRISSTWGGG LVDMVRSRRM LEIMESERLF
DRAAVLGSDL LAGLEELAQR HPRLLRNARG RGLMCAVDLP DRALRDEVVR LLREREHVLL
LPAGERALRF RPALTIGAEE LAAGVRALDR VLTHLVSPEP EAAEKASPPA TATQEKGLR
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