Gene Franean1_2363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2363 
Symbol 
ID5670759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2807334 
End bp2808476 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID641241280 
Productputative NADH-flavin reductase-like protein 
Protein accessionYP_001506701 
Protein GI158314193 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0671024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGGG CCCAGCTCCG GGCCGCGTCG ACCAGTTGCA GCAGCGACCG GCCGAGGGCG 
GTCAGCCGGT ACTCGACCCG GGGCGGGTTC TCGTCGAAGG CGTTTCTGCT CACCAGGCCG
TCGCGTTCCA TCGCACGGAG GGTTTCGGTC AGGACCTTCG CGCTCACCGA GCCGAGGATC
TGCCTGAGCT CGGTGAACCG CCGCGGCCGC GCCTCGAGAC ACAGGACGAC CATCGCGGTC
CACTTGTCGC CGATCCGCAC TGGGAATGCG CTCATCGGGC AGGCCGGATC GAACGTCGGG
GCTTCGGCCG CGTTCTCCAT TCCGCCAAGG GTAGCCGGTC ACGTTGCGGT AACCGGCCCA
CCATCCCCTA GTTTCTCCAC CATGACAGGA ACACAGCCCG CGGGGACGGG ACCCCGGCCA
CCTGCTCAAC TGCGCGCTGC CGTGCTCGGT GCCGGTGGCC GAGCCGGACG AGCCGTCAGC
CGGGAGCTCG TCATCCGGGG ACATCGAGTG ACCGGGGTGG TGCGGGACAT CCGCCGACAC
TCCTCACTCG GAGACCTCGG GGTCGACGTG GCAGAGGCGG ATGCCACCCG CGGCGCCGAC
CTCGTCGAGA TTCTGCGCGA GGCCGATGTC GTCGTAGTCG CCGTGACGCC CTTTTCGGCG
CCGCCGCCTG CGTTCGACGA TTTTGACGAG GCATTTTACG AACATGTCGT GGCCGGGGTC
GTCGGCGCCG CGCGGGGGTC GCCGGCGACC CGGCTGATCA CGGTCGGGCT GTTCGCCACG
CTGACCATGG CCGACGGGCG CACGGCCATG GACGACCCGG CGGTCTTCCC GCCGCGGCTT
CTGCCGTTCG CACGGGCCCA CGCCCGCGAG CTGCCCGCGC TACGCCGCCT CGCGTCGGCG
CACGACTGGT TGGTCGTCAC CCCACCCGCG GGGCTGCGGG CCGATGGCGT CGATGACACG
GCGGGCTACG CGCTCGTCGA ACCGCCCGTC GACCACCGCC TGTTCGAAGG GGTGCTCGGG
TACGGCCAGC TGGCGCGGGC CGTGGCGGAT CAGTCCGAGA CCCCGACCCT GCACTGGACC
CAGGTGGCCG TTCTGCCCGC GCCGAGAACA ACCGTGGACG AGGCGGGCAC CGGAATCGGG
TGA
 
Protein sequence
MSRAQLRAAS TSCSSDRPRA VSRYSTRGGF SSKAFLLTRP SRSIARRVSV RTFALTEPRI 
CLSSVNRRGR ASRHRTTIAV HLSPIRTGNA LIGQAGSNVG ASAAFSIPPR VAGHVAVTGP
PSPSFSTMTG TQPAGTGPRP PAQLRAAVLG AGGRAGRAVS RELVIRGHRV TGVVRDIRRH
SSLGDLGVDV AEADATRGAD LVEILREADV VVVAVTPFSA PPPAFDDFDE AFYEHVVAGV
VGAARGSPAT RLITVGLFAT LTMADGRTAM DDPAVFPPRL LPFARAHARE LPALRRLASA
HDWLVVTPPA GLRADGVDDT AGYALVEPPV DHRLFEGVLG YGQLARAVAD QSETPTLHWT
QVAVLPAPRT TVDEAGTGIG