| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2340 |
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| Symbol | |
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| ID | 5670738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2787487 |
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| End bp | 2789007 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241259 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001506680 |
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| Protein GI | 158314172 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.512672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGC GTCCGACCGC TATCGGCCGG ACGACAGCCG GCCAAGCCCG CGGGGACAGG
ACAACCGATG ACGAGACGGC GGTGACCGGG CGAACGGCGC ACGCCGCACA GCCCACCCTG
GCGCGCGTCC TGAGCGGGCG GATGCTGTTG TTCCTCGTGC TCGGTGACGT CCTCGGATCG
GGGATCTACG CGCTCACCGG GCAGATCGCC GCCGACGTCG GCGGGATGAT CTGGGCACCG
TTCCTGATCG CCTTCGCACT GGCGTTCCTC ACCGGGACGG CCTACGCCGA GCTTGTCGGC
AAGTACCCCC GGGCGGCCGG AGCAGCACTC TACGCCAACG AGGCGTTCCG TCGCCCGTTT
CTCACCTTCA TGGTCGGCTT CACCGTGCTG GCCGCCGGGA TCACCTCCAC CGCCACGGCC
GCGCGGGCCA TTGGGGGCAA ATACCTCGCG GAGTTCGTGG CGGCCCCGAC GGTCGTCGTC
GCGGTCGTGT TCATCCTGCT GACCGCGGTC CTCAACGCCC GTGGGATCGA GGAGTCGGCC
CGGGTGAACC TTGTGCTCAC CGTGATCGAG CTGACCGGGC TGTTGCTGAT TGTCGGGATC
GGCGTGCACG CGCTGGCTAC CGGTGCGGGC GAACCGGGAC GGGCCTTCGA GCTGCGTGCC
GAGGGGCCTG CGCCGCTCGC CCTGCTCGCC GGCACGACGC TCGCGTTCTA CGCGATGCTC
GGCTTCGAGA ACTCGGTGAA CCTCGTCGAG GAGGCCCGCC GGCCGCGCCG GGACCTGCCC
CGGGCGCTGT TCGGCGGCAT GTTCATCGCC GGCACGGTCT ACCTGTTCGT CGCGTTCACC
TGCGCGATGC TGGTGGATCC CGACATCCTC ACCGGCTCCG GTGCCCCGCT GCTGGAAGTG
GTGAAGGCCT CCGACGTGCC GGTGCCGTCG AAGCTGTTCG CCGCGGTCGC GCTGGTCGCG
GTCGCTAACA CCGCCCTGAT GAACATGGTG ATGGCCTCCC GTCTCGTCTA CGGCATGGCT
GCCCAGGGCA CGATCCCGAC CGTCTTCGCG CGGGTGCTGC CCGGCCGACG CACCCCGCCG
ATAGCGATCG GCTTCGTGAC GGCCCTGACG GTGGCGCTGG CCAGCACCGG CCAGCTGGCC
GGCCTTGCCG ACACCACCGT CCTGCTCCTG CTGCTGGTCT TCTTCGTCGT CAACATCAGC
GCGCTGGTGC TGCGTCGCGA GCCCGTCCCG CCGGGCGCCT ACCGCGCCCC CACCTGGGCC
CCGGCACTCG GCGCGCTGTC CTGCGCGGCG CTGGCCACCC CGCTGGTCCA CCGCGAGGGC
ACCGTCTACC TGCGCGCCCT CGGCCTGCTC GCGCTCGCCG TCGTCCTCGT CCTTGCCCAG
AAAGTTGTCA GCGGCCGGTT CCGCGCGTGT GAGTTATCTG GTGCCGCCAG ACCGGCCCCG
TCACAGCCCT ACCCGACGGC GACGGGCACA GCCGACTTCT CTGGATCACG GACCTCCTCC
CCGACAGCCT GGCGGGCCTG A
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| Protein sequence | MNGRPTAIGR TTAGQARGDR TTDDETAVTG RTAHAAQPTL ARVLSGRMLL FLVLGDVLGS
GIYALTGQIA ADVGGMIWAP FLIAFALAFL TGTAYAELVG KYPRAAGAAL YANEAFRRPF
LTFMVGFTVL AAGITSTATA ARAIGGKYLA EFVAAPTVVV AVVFILLTAV LNARGIEESA
RVNLVLTVIE LTGLLLIVGI GVHALATGAG EPGRAFELRA EGPAPLALLA GTTLAFYAML
GFENSVNLVE EARRPRRDLP RALFGGMFIA GTVYLFVAFT CAMLVDPDIL TGSGAPLLEV
VKASDVPVPS KLFAAVALVA VANTALMNMV MASRLVYGMA AQGTIPTVFA RVLPGRRTPP
IAIGFVTALT VALASTGQLA GLADTTVLLL LLVFFVVNIS ALVLRREPVP PGAYRAPTWA
PALGALSCAA LATPLVHREG TVYLRALGLL ALAVVLVLAQ KVVSGRFRAC ELSGAARPAP
SQPYPTATGT ADFSGSRTSS PTAWRA
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