| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2289 |
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| Symbol | |
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| ID | 5670688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2735375 |
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| End bp | 2735914 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241209 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_001506630 |
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| Protein GI | 158314122 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00777] alkylhydroperoxidase, AhpD family
[TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0232059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTCG CCCGGCTGCG GGAGCTGCTT CCCGACTACG CCAAGGACCT GCGCCTCAAC
CTCGGCTCGG TGACCTCCCA GTCGCAGCTG AACAACCAGC AGCTGTGGGG CACCGTTCTG
ACGTCGGCGA TCGCCAGCCG CGGCGCGACC ACCCTGACCG AGCTCGAGGC CGAGGCGCTG
GAGCACCTCA GCCCCGAGGC CGCCAAGGCG GCTCGCACGG CCGCCGCGCT GATGGCGATG
AACAACGTGT ACTACCGGAC GCTGCACCTG CTGGAGGACA AGGAGTACTC CAGGATGCGC
GCCGGGCTGC GGATGAACGC CATCGCCAAC CCCGGCGTCG ACAAGGTCGA CTTCGAGCTC
TGGTCGCTGG CCGCGTCGGC GGTGAACGGC TGCGGCATGT GCCTGACCGC CCACGAGCAC
GAGCTGCGTG GGCGGGGGGT GTCGCGCGAG GTCATCCAGG ACGCGATCCG GGTCGCCTCG
GTCGTGCACG CGGTGGCCGT GACGATCGAG AGCCACGAGC AGGTTCCGGC CACCGCCTGA
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| Protein sequence | MGVARLRELL PDYAKDLRLN LGSVTSQSQL NNQQLWGTVL TSAIASRGAT TLTELEAEAL
EHLSPEAAKA ARTAAALMAM NNVYYRTLHL LEDKEYSRMR AGLRMNAIAN PGVDKVDFEL
WSLAASAVNG CGMCLTAHEH ELRGRGVSRE VIQDAIRVAS VVHAVAVTIE SHEQVPATA
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