| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2229 |
|---|
| Symbol | |
|---|
| ID | 5670628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2667756 |
|---|
| End bp | 2668121 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641241149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506570 |
|---|
| Protein GI | 158314062 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1872] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0406139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0156197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCCG GGACACTCCC CGCCCCGTGC CGCCGGCCCG TCGGGGACGA TGGACGGGTG
CGCGTAGCGA TCCGGGTGCG TCCCGCCGCC GACCGGACGG CCGTGGGGCC AGCGACGTCC
GACCCGACCC ACGGCCGGCT GCTGGTCGTG CGCGTACGGG AACCGGCGGT CGAGGGCCGG
GCGAACGAGG CGGCGCTGCG CGCCCTCGCG CAGGCACTGG GTGTCCGCCG GTCCGACGTG
ACCCTGACCC GCTCGATCGG GAGGGTCAAG TTCATCGAGG TGGACGCTCC GGACGACGTG
ATCACGCGGC GAGTCGAGGA ACTGGCGCAA CATTCCGACC CGGCCGCACG TCTGGACTCC
AGGTAG
|
|---|
| Protein sequence | MPPGTLPAPC RRPVGDDGRV RVAIRVRPAA DRTAVGPATS DPTHGRLLVV RVREPAVEGR
ANEAALRALA QALGVRRSDV TLTRSIGRVK FIEVDAPDDV ITRRVEELAQ HSDPAARLDS
R
|
|---|
| |