Gene Franean1_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2154 
Symbol 
ID5670554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2582566 
End bp2583273 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID641241075 
Productmethyltransferase type 12 
Protein accessionYP_001506496 
Protein GI158313988 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.988172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACC AGAATAGTTT GTATACCGAC CAAAGATATA TCAGAAGCAA TCCTGACTGG 
CATGACGGCG ATGGAGCCTG GAAGGCGCTC CAGATAGCAG AGATCATGTC CCGTAACCAC
CTTCGACCAG ATACTGTCTG CGATGTCGGA TGCGGAACCG GCCGGGTGCT ACATACGTTG
CAAGAACAGG TTCCCGGAAT TCGCCGCCTG GTTGGTTTTG AGATCTCCGA AGCGCCGCTG
CGGATCAGAG AAAGCGAGGG CAACACTGTA GTCGAACTCG TCGTTGGGGA CGCCCGTGAG
AGTCATGAGC ATTTCGACCT TCTTCTGATG GTCGACGTCT TCGAGCATGT CGACGACTAT
CTGGGATTCC TCCGTGATTT TCGCGACCGG GCCGATAGTT TCATCTTCCA CATCCCGCTG
GATCTGTCAG TGCAGTCAGT CCTGCGTTCG ACGCCGATCA TTCGGGCTCG GCAGAGTGTA
GGGCACCTGC ACTACTTCAG TCGCGAGACT GCGCTCGCCA CACTCGCCGA CGCCGGCTAC
CGGGTACGCG AAGAGACGTA CACCCGCGGC GGGCTGGAGA TAACAGGGAC TGGACGAGGC
CGAAGAGCTG CGCGGATCCC CCGCGCGATC GCCTACCGGA TGAGTCCGGA CCTGGCGGCC
CGACTCCTCG GCGGGTTCTC GCTACTGGTG CTGGCTGAGC CTGCATGA
 
Protein sequence
MIHQNSLYTD QRYIRSNPDW HDGDGAWKAL QIAEIMSRNH LRPDTVCDVG CGTGRVLHTL 
QEQVPGIRRL VGFEISEAPL RIRESEGNTV VELVVGDARE SHEHFDLLLM VDVFEHVDDY
LGFLRDFRDR ADSFIFHIPL DLSVQSVLRS TPIIRARQSV GHLHYFSRET ALATLADAGY
RVREETYTRG GLEITGTGRG RRAARIPRAI AYRMSPDLAA RLLGGFSLLV LAEPA