| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2141 |
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| Symbol | |
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| ID | 5670541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2570359 |
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| End bp | 2571036 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641241062 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_001506483 |
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| Protein GI | 158313975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCAGG AGCACTGGTC AGTACTCATA GTCTGCACCG GCAATGTGTG CCGTTCACCC
ATGGCGGAGC GCCTCGCGGT GGCCCGGCTG ACCCGGCTTG CCACGGAGGC GGGCGCATCG
GGCTCGGCGG CGAGCGTCAG CAGTGCGGGA GTCCGGGCGT GGGTCGGCGA ACCCATGGAC
CCGCACGCGG CGACCGTGCT GGCCGAGCGG GGAGCAGACC CCGCCGGGTT CCGCTCCCGC
GCGGTGACAT CCGTGATGGT GGAGCAGGCG GACCTGGTGC TCTGCGCGAC GCGGGCACAT
CGGGCCGAGG TCGTGGGGCT TGCCCCGCGC ACCGTCCGCC GAACCTTCAC CCTGCGTGAG
TTCGCGCGTC TGACAGATGC GGTCGGACCG GAACGCATCG ATACGGCTGC CGGTACGCTC
GCCGCCCTGC ATGAACGCGG AGATTTCCGC GCGGCGGGGA CGGCGCTCGT GGCGGCCGGG
GTGACCGCCC GTGGCACGGT TCCTCCTGTC TCCGCAGCGG ACGACGATCT CGTGGATCCA
CTGGGCGGCG GCCTCGACGC CTTCCGCGCG TGCGCGGATG CCATCGAGGC CGCCCTCGAC
CCACCAACCC GTCTGCTCGC TGTCCTCCTG GGCGTCGCGG CCCCCCGCCG AACCGGGGCC
CGGACCCAGC AGGCCTAG
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| Protein sequence | MEQEHWSVLI VCTGNVCRSP MAERLAVARL TRLATEAGAS GSAASVSSAG VRAWVGEPMD
PHAATVLAER GADPAGFRSR AVTSVMVEQA DLVLCATRAH RAEVVGLAPR TVRRTFTLRE
FARLTDAVGP ERIDTAAGTL AALHERGDFR AAGTALVAAG VTARGTVPPV SAADDDLVDP
LGGGLDAFRA CADAIEAALD PPTRLLAVLL GVAAPRRTGA RTQQA
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