Gene Franean1_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2125 
Symbol 
ID5670525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2553229 
End bp2553768 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID641241046 
Producthypothetical protein 
Protein accessionYP_001506467 
Protein GI158313959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGAC TCCAGCTTCC CGACCCTGCG CTGCGGGACA CCAAGTACCT GGCCTCCCAG 
GAACGCCTGG TGATGATGGT CCGGCTGCAC TGGGCCATCA TGCTGCCGGT CCTTCTGCAG
ACGCTGGGTG CCGTCATGCT CGCGCTCGTC GTGAACATCC TCTTCGCGGC GCAGGGCATC
GACACCGGGC CGATCACCAC TGTGCTGTGG TACTTCGCCC TGTTCATGAT CCTCCGGATG
CTCTGGAAGA TCGCGGACTG GCACTTCGAC CACCTGATGA TCACCGACAA ACGGTTGCTG
AAGGTGTCCG GCATCGTCTT CCGGAAGGTT CAGACGATGC CGCTGTCGAA GATCACGGAT
CTCACCTACA ACCGGGACCC GCTCGGGCGG CTCCTCGGCT ACGGCGAGTT CGTGGTCGAG
TCCGCGGGGC AGGACCAGGC CCTCTCGAAG ATCAATTTTT TGCCGCGGCC GGACCGCCTC
TACCTCACCC TGGTCGACAT GACCTTCGGT GGCGGCCCGT CCCCGGCAGG CGACGACTGA
 
Protein sequence
MVRLQLPDPA LRDTKYLASQ ERLVMMVRLH WAIMLPVLLQ TLGAVMLALV VNILFAAQGI 
DTGPITTVLW YFALFMILRM LWKIADWHFD HLMITDKRLL KVSGIVFRKV QTMPLSKITD
LTYNRDPLGR LLGYGEFVVE SAGQDQALSK INFLPRPDRL YLTLVDMTFG GGPSPAGDD