Gene Franean1_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2104 
Symbol 
ID5670504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2529704 
End bp2530705 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content75% 
IMG OID641241025 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_001506446 
Protein GI158313938 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCC ACGTGCCGCC GCCCTCCGCC CCGCCACCGC TGGTCGTCGT GAGCGGCGAC 
GAGGACCTCC TCGTCGCACG TGCCGTCCGG GAGGTGCTCG ACGCGGCAAG GGCCCGTGAT
CCGGAGGTCG AGGTGGTCGA CCGGTCACCC GGCGAGCTGA CCGAGGCCGA CATGATCGAT
CTTGGCGCCA CCTCGATGTT CGGGGGTGGC CGGGTGCTGG TGGTCCGGGG TGCTGCCGAC
CTGGCGGAGG AACTGCGCGA CGCGCTGTTG GCCTACGTGG CCCACCCGCT CGACGATGTG
GTCCTCGTTG TGGTCCACAG CGGCGTGGTG AAGAACCGCA AGCTCGTCGA CGCGATGAAG
AAGGCTGGCG CCCGGGTCAT GCCCGCGGCG AAGATCACCC GTCCGCGCGA CCGGCACGAC
TTCGTGATCG CGGAGATCCG CCGGCTTGGC GGGCGGATGA CCGACGAGGC GGTCCGTGCC
CTGCTTGACG CGGTCGGCGG TGACCTGCGC GAGATCGCGG CGGTGTGCGA CCAGCTCGTC
GCCGACACCG CCGGGGTGAT CGACGAGTCG GCGGTCGCCC GCTACCACCG GGGCCGGGCC
GAGGCGAGCG GGTTCGCGGT CGCGGACGCC GCCGTCGCCG GCGATCTGGC CGGCGCGCTG
ACCCTGCTGC GGCAGGCGCT CGAGGGCGGG ACGGCACCCG TCCTGGTCAC CAGCGCCATC
GCCGGCGGGC TGCGTGACCT CGCCCGGGTG TCCGCCGTGG GCGGCGGGTC CAAGTGGGAC
GTCGCCAAGG CCCTCGGCAT GCCGGACTGG AAGGTCGAGC GCGCCCAGCG CGCGGCCCGG
AGCTGGTCGG ACGCGGGGCT GGCCCGGGCG ATCCGGGCGG TCGCGGTCGC CGACGCCGGG
GTCAAGGGCG CCGCCGTGGA CGCCGGGTAC GCCCTGGAAC GGCTCCTCCA CGAGGTCACC
CAGGCGCGAG GCCGGGGCGA GTACGCCGGG CGGGCGCGGT GA
 
Protein sequence
MLIHVPPPSA PPPLVVVSGD EDLLVARAVR EVLDAARARD PEVEVVDRSP GELTEADMID 
LGATSMFGGG RVLVVRGAAD LAEELRDALL AYVAHPLDDV VLVVVHSGVV KNRKLVDAMK
KAGARVMPAA KITRPRDRHD FVIAEIRRLG GRMTDEAVRA LLDAVGGDLR EIAAVCDQLV
ADTAGVIDES AVARYHRGRA EASGFAVADA AVAGDLAGAL TLLRQALEGG TAPVLVTSAI
AGGLRDLARV SAVGGGSKWD VAKALGMPDW KVERAQRAAR SWSDAGLARA IRAVAVADAG
VKGAAVDAGY ALERLLHEVT QARGRGEYAG RAR