| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2072 |
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| Symbol | |
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| ID | 5670473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2495711 |
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| End bp | 2496733 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240994 |
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| Product | putative OxPP cycle protein OpcA |
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| Protein accession | YP_001506415 |
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| Protein GI | 158313907 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
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| TIGRFAM ID | [TIGR00534] opcA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.833679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0837693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC TGTGGGACAC CACCGGATCG GCGGTGGTCA AGGCGCTGTC CGCCGAGCGG
CGGGCCGCCG GCGCGCTCGC GTTCGGCCTG GCGCTGACGC TCGTGGTGGT CGTGGACGAG
CAGCACGTCA GCCAGGCGGA GAGCGCCGCC ACCGCGGCCG CCGCCGCCCA CCCGTGCCGG
CTGCTGATCG TCGTGCGCCG GCAGATCGAC TCGCCGCACC CTCGGCTGGA CGCCGAGGTG
TCGATCGGCG GCCGGCTGGG GCCCGGCGAG GCCGTCGTGA TGCGGATGTC GGGCCGGCTC
GCGCTGCACG CCGAGTCGGT CGTGCTCCCG CTGCTCGCGC CGGACGCCCC CGTGGTCACC
TGGTGGTACG ACGCTCCCCC GGAGAAGATC GCCTACGACC CGCTCGGCGT GTTCGCCGAC
CGCCGGGTCA CCGGGACCTA CGCGGCCCAC GACCCGCTGG CCGCGCTGCT GCAGCGGGCC
GAGGACTTCG TCCCCGGTGA CACCGACCTG GCCTGGACCC GCATCTCGGG GTGGCGCACC
CTGCTGGCGG CCGCGTTCGA CCAGGTCTCC GAGCCGGTGG GGCCGGCGAC GGTCGTCAGC
GAGCCGGGCA ACCCCAGCGC CCGCCTGTTC GCCGGCTGGC TGCAGGCGAA GCTGCGGGTC
CCGGTAACGA TCACCGACGC GCCGGGTAAG AAGGGCATCC AGAGCGTCCG CCTGGCGGTG
GGCGACGGCG AGCTCTCACT GGCCCGCACG GACAGCCGTT CGGCCGGTAT CACCCGCACG
GGTTACCCGA CCAGGGTGCT GCCGCTGCCC GAACGAGGGC TGGGTGACCT GCTCGCGGAG
GAGCTGCGCC GCCTCGACGA CGACAGCGTG TACGCCGAGG CGCTCTCGGC CTGGAGCGGC
GTCCCGGATC TGAACAGCCG ACCGCTGCAC CGCGAGCACA TCTGGCGCGA TCCGGCGCTG
GAGCGCTCCG AGGCGGCATT CGCGGCGATC CCACCCGCGC CGATCCCGCC CGCGGCGTCG
TGA
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| Protein sequence | MTTLWDTTGS AVVKALSAER RAAGALAFGL ALTLVVVVDE QHVSQAESAA TAAAAAHPCR
LLIVVRRQID SPHPRLDAEV SIGGRLGPGE AVVMRMSGRL ALHAESVVLP LLAPDAPVVT
WWYDAPPEKI AYDPLGVFAD RRVTGTYAAH DPLAALLQRA EDFVPGDTDL AWTRISGWRT
LLAAAFDQVS EPVGPATVVS EPGNPSARLF AGWLQAKLRV PVTITDAPGK KGIQSVRLAV
GDGELSLART DSRSAGITRT GYPTRVLPLP ERGLGDLLAE ELRRLDDDSV YAEALSAWSG
VPDLNSRPLH REHIWRDPAL ERSEAAFAAI PPAPIPPAAS
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