Gene Franean1_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2034 
Symbol 
ID5670435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2445264 
End bp2445926 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID641240955 
Producthypothetical protein 
Protein accessionYP_001506377 
Protein GI158313869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.211167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.492439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG AACCACCCGG CTGGATCCGC GATCTCCTGT CCACGCCGAG GCTGCGGCCC 
TACCTGCGCG CGAGCGACGG ATCTGCGGAG GTGGCAGTCC GGCTCTACTG GTGGAACTCG
GCCGTCTCAG CCGCCTTTTA CGGCCCCCTG CACTGCCTCG AGATAGGCCT GCGCAACGCG
CTGCACGGCA CACTCAGCGG ACACTACGGC CGTCCCGACT GGTGGACCCT CGCTCCGCTC
AGCCCGCACG GCGCACGGAA GGTGAAGGAC GCGCGGGAGA AACTCGCCGG GCCGGACGGC
CGCCAGGCCG GCCCCGACGA CGTGGTCGCC GCCCTTACCT TCGGCTTCTG GGTCGCCCTG
CTCAGCCGCG GGTACGACCG AACGTTCTGG GTCCCCGTCC TCCATCGGGC GTTCCCACAC
TACCGAGGGT CTCGCCGCGA ACTACATGAC AACTTCGATG CCATGCTCCG GCTCCGTAAC
AGGGTGATGC ACTACGAGCC GATCCATCAC CGCGACCTCG TCGCCGACCG GGCGAAGATC
TATCGCCTGC TGAGCTATCT CTCGCCAGAG GCGGCGCGAG AGATCGAGCT TCTCGACCGC
ATACCCGAGG TGCTGTCCCG GCGGGGTGAG ATCCGCACCC GGGACGACGC CCCGAGGTTC
TGA
 
Protein sequence
MSAEPPGWIR DLLSTPRLRP YLRASDGSAE VAVRLYWWNS AVSAAFYGPL HCLEIGLRNA 
LHGTLSGHYG RPDWWTLAPL SPHGARKVKD AREKLAGPDG RQAGPDDVVA ALTFGFWVAL
LSRGYDRTFW VPVLHRAFPH YRGSRRELHD NFDAMLRLRN RVMHYEPIHH RDLVADRAKI
YRLLSYLSPE AAREIELLDR IPEVLSRRGE IRTRDDAPRF