Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2034 |
Symbol | |
ID | 5670435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2445264 |
End bp | 2445926 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641240955 |
Product | hypothetical protein |
Protein accession | YP_001506377 |
Protein GI | 158313869 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.211167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.492439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCCG AACCACCCGG CTGGATCCGC GATCTCCTGT CCACGCCGAG GCTGCGGCCC TACCTGCGCG CGAGCGACGG ATCTGCGGAG GTGGCAGTCC GGCTCTACTG GTGGAACTCG GCCGTCTCAG CCGCCTTTTA CGGCCCCCTG CACTGCCTCG AGATAGGCCT GCGCAACGCG CTGCACGGCA CACTCAGCGG ACACTACGGC CGTCCCGACT GGTGGACCCT CGCTCCGCTC AGCCCGCACG GCGCACGGAA GGTGAAGGAC GCGCGGGAGA AACTCGCCGG GCCGGACGGC CGCCAGGCCG GCCCCGACGA CGTGGTCGCC GCCCTTACCT TCGGCTTCTG GGTCGCCCTG CTCAGCCGCG GGTACGACCG AACGTTCTGG GTCCCCGTCC TCCATCGGGC GTTCCCACAC TACCGAGGGT CTCGCCGCGA ACTACATGAC AACTTCGATG CCATGCTCCG GCTCCGTAAC AGGGTGATGC ACTACGAGCC GATCCATCAC CGCGACCTCG TCGCCGACCG GGCGAAGATC TATCGCCTGC TGAGCTATCT CTCGCCAGAG GCGGCGCGAG AGATCGAGCT TCTCGACCGC ATACCCGAGG TGCTGTCCCG GCGGGGTGAG ATCCGCACCC GGGACGACGC CCCGAGGTTC TGA
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Protein sequence | MSAEPPGWIR DLLSTPRLRP YLRASDGSAE VAVRLYWWNS AVSAAFYGPL HCLEIGLRNA LHGTLSGHYG RPDWWTLAPL SPHGARKVKD AREKLAGPDG RQAGPDDVVA ALTFGFWVAL LSRGYDRTFW VPVLHRAFPH YRGSRRELHD NFDAMLRLRN RVMHYEPIHH RDLVADRAKI YRLLSYLSPE AAREIELLDR IPEVLSRRGE IRTRDDAPRF
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