Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2001 |
Symbol | |
ID | 5670402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2407324 |
End bp | 2407917 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641240922 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001506344 |
Protein GI | 158313836 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.803243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0833293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGCGC ACGCAGGTCA CGGGTCGGAT GGCGCGGGGG GCCGGGGATC GGGCCACGAC CCCGGCCAGG GTGCCGGTCG CGAGCACGAC CACGGGAGCG GCCGAGCGGG GGAGACCGCC GCCGAGCCCC GCTGGCTCGA CGCCAACGAA CGGGCGGCCT GGCGCGGTCT GATCGGTGTG ATGACCCGGC TGCCCGCCGC CCTCGACACC CAGCTCCGCC GGGACGCCGG ACTGAGCCAC TTCGAGTACT CGGTGCTGGT CGGGCTCTCG GAGGCACCGA ACCGGACGCT CGCGATGGCT CGGCTCGCCC AGTTCACCTG CGGCTCGCTG TCCAGGCTCT CGCACGCGGT CAAGCGCCTC GAGGACAAGG GCTGGGTGCG CCGTGCCCCG TGCGCGGCCG ACGGACGAGT CACGAACGCC ACGCTGACCG ACACCGGTTT CGCGAAGCTG GCCGACTCCG CTCCCGGCCA TGTGGAGACC GTTCGCGACC TGGTCGTCGA GGCGCTCGCG CGCGACCAGC TCGACCAGCT CGCGGCCATC TGCGGCCAGA TCCTCGACCG CCTCGACACC GCGCCGCCGC CCCGGCCCCG CTGA
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Protein sequence | MNAHAGHGSD GAGGRGSGHD PGQGAGREHD HGSGRAGETA AEPRWLDANE RAAWRGLIGV MTRLPAALDT QLRRDAGLSH FEYSVLVGLS EAPNRTLAMA RLAQFTCGSL SRLSHAVKRL EDKGWVRRAP CAADGRVTNA TLTDTGFAKL ADSAPGHVET VRDLVVEALA RDQLDQLAAI CGQILDRLDT APPPRPR
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