Gene Franean1_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2001 
Symbol 
ID5670402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2407324 
End bp2407917 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID641240922 
ProductMarR family transcriptional regulator 
Protein accessionYP_001506344 
Protein GI158313836 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.803243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0833293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCGC ACGCAGGTCA CGGGTCGGAT GGCGCGGGGG GCCGGGGATC GGGCCACGAC 
CCCGGCCAGG GTGCCGGTCG CGAGCACGAC CACGGGAGCG GCCGAGCGGG GGAGACCGCC
GCCGAGCCCC GCTGGCTCGA CGCCAACGAA CGGGCGGCCT GGCGCGGTCT GATCGGTGTG
ATGACCCGGC TGCCCGCCGC CCTCGACACC CAGCTCCGCC GGGACGCCGG ACTGAGCCAC
TTCGAGTACT CGGTGCTGGT CGGGCTCTCG GAGGCACCGA ACCGGACGCT CGCGATGGCT
CGGCTCGCCC AGTTCACCTG CGGCTCGCTG TCCAGGCTCT CGCACGCGGT CAAGCGCCTC
GAGGACAAGG GCTGGGTGCG CCGTGCCCCG TGCGCGGCCG ACGGACGAGT CACGAACGCC
ACGCTGACCG ACACCGGTTT CGCGAAGCTG GCCGACTCCG CTCCCGGCCA TGTGGAGACC
GTTCGCGACC TGGTCGTCGA GGCGCTCGCG CGCGACCAGC TCGACCAGCT CGCGGCCATC
TGCGGCCAGA TCCTCGACCG CCTCGACACC GCGCCGCCGC CCCGGCCCCG CTGA
 
Protein sequence
MNAHAGHGSD GAGGRGSGHD PGQGAGREHD HGSGRAGETA AEPRWLDANE RAAWRGLIGV 
MTRLPAALDT QLRRDAGLSH FEYSVLVGLS EAPNRTLAMA RLAQFTCGSL SRLSHAVKRL
EDKGWVRRAP CAADGRVTNA TLTDTGFAKL ADSAPGHVET VRDLVVEALA RDQLDQLAAI
CGQILDRLDT APPPRPR