Gene Franean1_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1994 
Symbol 
ID5670395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2396467 
End bp2397273 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID641240915 
ProductGntR domain-containing protein 
Protein accessionYP_001506337 
Protein GI158313829 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.255259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0993193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCG TGGAGCGGGT GCGCCCCGCC TACGTCCAGG TTGCGGCTCA GCTACAGGAG 
CTGATCGTGC GCGGCGATCT GACCGCCGGT CAGCGCCTGC CCGTCGAGGC CGAGCTGTCG
ACGATGTTCG GCGTCAGCCG GTCCACGGTC CGCGAGGCGC TGCGGCTGCT GTCGTCCCAG
CACCTGGTCG AGACGCGGCG GGGAGTCCAC GGCGGCACCT TCGTCGCGGC GCCGGACACC
GGCCTGATGG GCGATTTCCT CGAGACCGGC CTCGGCCTGC TCTCGGGCGC CGACCTGGTC
AGTGTGGATC AGCTGATCGA GGCCTGTGAC CTGCTCGAGG TCCCGGCCGC CCGGCTGGCC
GCCGTCCGGC GGACGCCCGC CCAGCTCGAG ATTATCCGGA AAGCGACCAC GGCCACCGAA
CGGATCGAGG ATCCGGTCGA ACGGTACGAG GGCAGCAACG GATTCCACGC CTCGATCCTG
GCCGCCTGCG GCAATCCCCT GCTGAATCTG GTGGCGACAC CGGTCTTCAA CGTTCTACGG
ACCCGCTTCC AGCGTTCGAG CGTCGACGCC ACATTCTGGG AACGCTCCGC CCGGCAGCAC
CACGAGATCT ACGAGGCCAT CGAACGCGGC GACGCCGAAC AGGCCGGAGT TCTGATGCGC
GCCCACATAG ACGAGTTGCG CGTTCTCGTT CCCGGCGGGG TGGAGGCCGT GCGACGGCGG
ACCGTCGGCA CCGGATCGGT TGAGGCCGCG AGTGCGATCG CCGCGGCCAC CGAATCGCCG
GCGGCCGCGG GCTCGGCCAC CGTCTGA
 
Protein sequence
MLSVERVRPA YVQVAAQLQE LIVRGDLTAG QRLPVEAELS TMFGVSRSTV REALRLLSSQ 
HLVETRRGVH GGTFVAAPDT GLMGDFLETG LGLLSGADLV SVDQLIEACD LLEVPAARLA
AVRRTPAQLE IIRKATTATE RIEDPVERYE GSNGFHASIL AACGNPLLNL VATPVFNVLR
TRFQRSSVDA TFWERSARQH HEIYEAIERG DAEQAGVLMR AHIDELRVLV PGGVEAVRRR
TVGTGSVEAA SAIAAATESP AAAGSATV