Gene Franean1_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1993 
Symbol 
ID5670394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2396065 
End bp2396460 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content69% 
IMG OID641240914 
Producthypothetical protein 
Protein accessionYP_001506336 
Protein GI158313828 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0722461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0925623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGGG AGTACCTGAA CCCGGCGGGC GCGTGGGACA CGGCGGGGCG CAGCTACAGC 
CACGTCGTCA AGATCAGTAG TCCGAACAGG CTGATCTTTC TGGCCGGCCA GGCGCCGGTG
GGCGAGAACT TCAAGGTCAT CGGCGGCGAG GACGTCGCCG AGCAGACCCG GGCAACGTTC
GCGAACATCA GCCGCGCGCT CGAGGCCGCG CGAAGAACGG GCCCTTCCCC GTCTCGATGG
CGCACGCCGC CCATGCGGCC CTGCCGGGCT CGGAGCTGGT GGTCGTGGAC TGGGCCCGCC
CACGTTCCCT ACCTGGAACG TCCCGAGGTC TTCAACGAGG CGTTTCTCGA CTTCGTGACC
CGCCGTGTCC TGACGACCGG CCGCGCCGCG ACCTGA
 
Protein sequence
MEREYLNPAG AWDTAGRSYS HVVKISSPNR LIFLAGQAPV GENFKVIGGE DVAEQTRATF 
ANISRALEAA RRTGPSPSRW RTPPMRPCRA RSWWSWTGPA HVPYLERPEV FNEAFLDFVT
RRVLTTGRAA T