Gene Franean1_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1983 
Symbol 
ID5670384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2382270 
End bp2383565 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content71% 
IMG OID641240904 
Producthypothetical protein 
Protein accessionYP_001506326 
Protein GI158313818 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.564684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCTG ACGCCGCAGG CCCCGCGTTC GACGTGTGTG TGGTGGGCGC AGGCCCGGCC 
GGGATGATGC TCGGCCTGTT GCTCGCCCGC GACGGCCTCG AGACCTGCGT GTTGGAGAAG
CACGCCGACT TCCTGCGCGA CTTCCGCGGG GACACCGTGC ACCCGTCCAC GCTCGATCTG
CTGGATTCGA TCGGCCTTGG CGAACGCGTG CGCGACCTGC CCGGACGCCA GGTCACCGGG
CTGAGATTCA GCTTCGTGGA CGGGACCTAC CAGGTCGCCG ACTTCTCCCG GCTGCGGGTG
AGTCATCCCT ACATTTACTT CGTCCCGCAG TGGGACCTGC TGGAGATGCT CGCGCAGGCC
GGCGCCGGCA TTCCGACCTT CACGCTGCTG CGTGAGCACG AGGTGACCGG CCTTGTCCGG
GATGGCGATC GGGTGGTGGG CGCCGAGGCT CGGACCGCCC AGGGCCGCCG GGTGGTGCGG
GCGCGTCTCA CGGTCGGTGC CGACGGCCGT GGATCTGTCG TCCGCGCGTC GCTTGGCCTG
CCACTGCGAC GTTTCGGCGC TCCGATGGAT GTGTTGTGGT TCCGGCTCCC CCGCCGGGCG
AGTGACGGGG ATGGCCTCGG CGGCCTGGTC GGCCCGGGAC GGATGCTCAT CCGCATCGAT
CGGGGCAGCT ACTGGCAGAC CGCCTATCTG ATCCGCAAGG GTGGATACGA CGCCGTGCAC
GCGGCGGGAC TCGACTGCCT CCGCGACAAC GTCGCGACGC TCGCTCCGGA CCTCGCCGAC
CGGGTCGATG AGATCAGAAG CTGGGAGGAC GTCCACCTGC TGAGGGTGCA GGTCGACCGG
GTGCGGCGCT GGCACGCTCC CGGCGCACTG CTCATAGGGG ACGCCGCTCA CGCGATGTCG
CCGATCGGCG GGGTCGGGAT CAATCTGGCG ATCCAGGACG CGGTCGCCGC GGCACGTATC
CTCCGTGCGC CCCTGCTCGC CGGCCGGGGC ACCGGAACCG CACCACCGCC CGGGCGTCTG
GCCGCGGTAC AGCGTCGCCG CACGCCACCT ACCATCCTCA CCCAGCTTGC GCAGCGGGTC
GCCCAACGAG GATTGCTGCG CCCGGTGCTG GAGGCCGGCG ACAAGCCGGT CACGGCGCCC
ATGCCGGTCC GGCTCCTCGC CCGGATACCG GCCGCCCAGC GCGTGCTCGC CCGTGCGGTC
GGCGTCGGGC TCCGGCCCGA GGCGGTCGGA CAGGCCGCAC CACACACCGC GACGGAGAAC
GTTTCCCGTG CAGCCACCAA CGAGAATGAT CGTTAG
 
Protein sequence
MMPDAAGPAF DVCVVGAGPA GMMLGLLLAR DGLETCVLEK HADFLRDFRG DTVHPSTLDL 
LDSIGLGERV RDLPGRQVTG LRFSFVDGTY QVADFSRLRV SHPYIYFVPQ WDLLEMLAQA
GAGIPTFTLL REHEVTGLVR DGDRVVGAEA RTAQGRRVVR ARLTVGADGR GSVVRASLGL
PLRRFGAPMD VLWFRLPRRA SDGDGLGGLV GPGRMLIRID RGSYWQTAYL IRKGGYDAVH
AAGLDCLRDN VATLAPDLAD RVDEIRSWED VHLLRVQVDR VRRWHAPGAL LIGDAAHAMS
PIGGVGINLA IQDAVAAARI LRAPLLAGRG TGTAPPPGRL AAVQRRRTPP TILTQLAQRV
AQRGLLRPVL EAGDKPVTAP MPVRLLARIP AAQRVLARAV GVGLRPEAVG QAAPHTATEN
VSRAATNEND R