| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1979 |
|---|
| Symbol | |
|---|
| ID | 5670380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2378500 |
|---|
| End bp | 2379699 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641240900 |
|---|
| Product | glycosyl hydrolase 53 protein |
|---|
| Protein accession | YP_001506322 |
|---|
| Protein GI | 158313814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.861107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGG TCGGCGTGAC CGATTACGAC GCCGGGGAAC GGCGACGCAC CGCGAACAGC
GCGGCAACCG CGTTCGTGTT CGGGGCGCGG ACGCATCGGG CGGGTTCGAA GGCGATCATG
CGTCGCACGC CGAGCATGCT AAGGCTGCTG TCGATGGCGT TGCTCGCGAT GGTGGCGCTC
GCGGGCTGCG TTACCCCCAT CGGGGGTGGA GGCGGCCCCG CTCCGACGAC CAGTGCGGCC
CCCAGCCCCG CCGGCCCGAC GGGCTCGCCG TCCGCCGGCC CCACCCAGGC TCCGGACCCG
AGCTCGGTTC CGAACCCCGG CGTCACCCCG GTGCCGACCC TCACCTCGGC GCCGGTGACC
GCTGCCCCGG TGACCACTGC CCCGGTGACC ACTGCGCCGG GGGCCACGCC GAGCGCCGCG
CCAGTGCCCA CGACACCCGG GTCGACTGAT CCGCCTATCG GGACGGTTGC GAAGGGCGCG
AGCACCTGGT ACTTCGACAA GATCGCTCCG TCGATGACGG AGGCGGGAGT CTCGTGGTTC
TACACCTGGG GAGCCGCGCC GGAGCGGATC GCGGCGCCGG CGGGAGTCGA GTTTGTCCCG
ATGATCTGGG GGCCGGGCTC GGTCACTCCG CAGACCCTCG CGACGGTGAA GGCCAACGGC
CGCACCCTGC TCGGCTTCAA CGAGCCTGAC CTCCGCGGCC AGGCGGACAT GCCGGTTCAG
ACCGCTCTCG ATCTGTGGCC GCAGCTGGAA GCCACCGGAA TGCGTCTGGG TAGCCCGGCG
CCCGCCGCCG GCGCCGCGGA CCCGAACAGC TGGTTCGGCC AGTTCATGGC CGGCGCGGCC
CAGCGGGGCT ACAAGGTCGA CTTCATCGCG CTGCACTGGT ACGGCAGCGA CTTCGACCCC
ACCCGGGCGA CCGGTCAGCT CCGTGCCTAC ATCCAGGACG TGTACGACCG ATACCACCTG
CCGATCTGGC TGACCGAGTA CAGCCTGATG AACTTCTCAA CCTCACCCGC GACGGTCCCG
AGCGCTGAGG GTCAGGCGGC GTTCGTGACT GCCTCCACCG CGATGCTCGA GAGCCTTCCG
TTCGTTGAGC GCTACGCCTG GTTCGCGTTT CCCGCCAATC CCGACAGTCG GACCGGCCTG
TATGACGAGT CAGGCCAGCC GACCCCGGCT GGTGTCGCCT ACCAGGCGGC CGGCCGCTGA
|
|---|
| Protein sequence | MRRVGVTDYD AGERRRTANS AATAFVFGAR THRAGSKAIM RRTPSMLRLL SMALLAMVAL
AGCVTPIGGG GGPAPTTSAA PSPAGPTGSP SAGPTQAPDP SSVPNPGVTP VPTLTSAPVT
AAPVTTAPVT TAPGATPSAA PVPTTPGSTD PPIGTVAKGA STWYFDKIAP SMTEAGVSWF
YTWGAAPERI AAPAGVEFVP MIWGPGSVTP QTLATVKANG RTLLGFNEPD LRGQADMPVQ
TALDLWPQLE ATGMRLGSPA PAAGAADPNS WFGQFMAGAA QRGYKVDFIA LHWYGSDFDP
TRATGQLRAY IQDVYDRYHL PIWLTEYSLM NFSTSPATVP SAEGQAAFVT ASTAMLESLP
FVERYAWFAF PANPDSRTGL YDESGQPTPA GVAYQAAGR
|
|---|
| |