Gene Franean1_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1957 
Symbol 
ID5670358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2353687 
End bp2354424 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content76% 
IMG OID641240878 
Producttransport protein 
Protein accessionYP_001506300 
Protein GI158313792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.450425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.502996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGCC TGGCGTCGCT CGTCTCCTAT CCGGCGCTGC TCGCGGTGGG CCTCGAGCCG 
CAGGCCGCGA ACATGACGAA CTCGGCCGCG CTCATCTGCG TCGCGCTGGG CGCGGCCGCG
GGTTCACGTC CCGAGCTCGC CGGGCAGGCG CGGCGGGTCG CCCGCTACGG CGCGGCGACG
TTGGCCGGCG GGGCTGCCGG GGCGATCCTG CTGCTGACCA CCCCCGCGCG GGCCTTCGAG
CTCGTCGTGC CCTGGCTGAT CCTCGGCGCG GCCGTGCTCC TCCTGCTCTC GCCGCGCATT
GTGAGCGCGG CCGGCGGCGG TGCCGGCACG GCCGAGGGTG CCAGCGTGGA TGGCGGTGCC
GGCGGCCCGG CCCGGGGCGA GCGCCCGGCA ATGCTGCTCG CCGTGTTCGG TGTCGCGGTC
TACACCGGTT ACTTCGGCGC GGGCGCGGGC GTCGCACTGC TGGCGATCAT GGCGATCGCG
ATCCCGGAGT CGCTCGCCCG GGTCAACGCT GTGAAGAACG TCGCGTCAGG CTTCTCGAAC
GCGGTGGCCG CCGTCCTCTT CGCCGCGCTC GGATCGGTCG TGTGGGGAGC CGCCGTGCCG
CTGGCCGCCG GGCTGCTGGC CGGCGGGGCG ATCGGGCCCC GGATCGTCCG GGTCCTGCCG
GCGCCGCTGA TGCGCTGGAT CGTCGCCGCG GCCGCGACCG GACTCGCCGT CTCCCTGGCG
CTCGACGCCT ACACCTGA
 
Protein sequence
MAGLASLVSY PALLAVGLEP QAANMTNSAA LICVALGAAA GSRPELAGQA RRVARYGAAT 
LAGGAAGAIL LLTTPARAFE LVVPWLILGA AVLLLLSPRI VSAAGGGAGT AEGASVDGGA
GGPARGERPA MLLAVFGVAV YTGYFGAGAG VALLAIMAIA IPESLARVNA VKNVASGFSN
AVAAVLFAAL GSVVWGAAVP LAAGLLAGGA IGPRIVRVLP APLMRWIVAA AATGLAVSLA
LDAYT