| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1936 |
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| Symbol | gltD |
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| ID | 5670337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2323968 |
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| End bp | 2325413 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240857 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001506279 |
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| Protein GI | 158313771 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.336215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.23616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC CGACCGGCTT TCTCAAGCAC CGCCGGGAGC TGCCCACGCG CCGACCGGTG
GACGTGCGCA TCACCGACTG GCGCGAGGTG TACGAGTCGT TCCCGGAGCC GGCGCTGCGT
GACCAGGCGG GCCGGTGCAT GGACTGCGGC ATCCCGTTCT GCCACGAGGG CTGCCCGCTC
GGGAACATCA TTCCCGAGTG GAACGACCTC GCCCGCCGCT CGGACTGGTC CGAGGCGATC
GAACGGCTGC ACGCGACGAA CAACTTCCCG GAGTTCACCG GGCGGCTGTG CCCCGCGCCG
TGCGAGGCGG CCTGCGTGCT GGGCATCGGG GACGACCCGG TGACCATCAA GCAGATCGAG
GTCACCATCA TCAACCGTGC CATCTCGGAC GGGTCGGTCG TGCCGGTGCC GCCGTCGGTG
CGCACGGGCC GCCGCGTCGC GGTCGTCGGC TCGGGCCCGG CCGGCCTCGC CGCCGCCCAG
CAGCTCACCC GGGCCGGCCA CGAGGTGGTC GTCTACGAGC GGGCCGACCG CGCCGGCGGC
CTGCTCCGCT ACGGCATCCC CGAGTTCAAG ATGGAGAAGC GGGTCCTCGA CAACCGTCTG
GCCCAGATGG AGGCCGAGGG GACGTCGTTC GTCACCTCGT GCAACGTGGG CGTCGACATC
ACCGCCGACG AGCTGCGTTC GTCCTACGAC GCGGTCGTCC TGGCCGGCGG GTCGACGGTG
GGGCGTGACC TTCCCGTCCC CGGGCGGGAG CTGCGGGGCA TCCACCTGGC CATGGAGTTC
CTGGTCCCGG CGAACCGGGT GCAGCAGGGG GACCTGGCCG AGACGACGAT CTCCGCTGCC
GGCAAGCGGG TCGTGATCAT CGGCGGTGGC GACACCGGGG CGGACTGCCT GGGCACCTCG
CACCGGCAGG GCGCGCTGTC CGTCCACCAG CTCGAGATCA TGCCGAGGCC GCCCGCCTCC
CGGCCGCCGG CGAATCCGTG GCCGTCCTTC CCGATCGTCT ACCGGGTGTC CAGTGCGCAC
GAGGAGGGCG GCGAGCGGGT CTTCGCCGTC TCCACCGAGC GCTTCGTCGG CGATGACGAG
GGCAACGTGC GGGCCCTGCT CATGCACGAG GTCCAGATGG TCGACGGGCG CTTCCAGAAG
ATCGAGGGCA GCGAGACCGA GCTGCCGTGC GACCTGGTGC TGCTGGCGAT GGGCTTCGTC
GGCCCGGAGC GCCCCGGCCT GCTCGAGCAG CTCGGCGTCG ACCTGGACGC CCGCGGCAAC
GTCGCCCGCG ATCTTGGTTG GTCGACGTCG GTGCCCGGCG TGTTCGTGGC CGGTGACATG
GGCCGTGGCC AGTCCCTGAT CGTCTGGGCC ATCGCGGAGG GGCGCTCGGC GGCCGCCGCC
GTCGACCGGC ACCTGATGGG GACGACAGAC CTGCCGGCTC CGATCCTGCC GACCCGCCGG
CCCTGA
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| Protein sequence | MADPTGFLKH RRELPTRRPV DVRITDWREV YESFPEPALR DQAGRCMDCG IPFCHEGCPL
GNIIPEWNDL ARRSDWSEAI ERLHATNNFP EFTGRLCPAP CEAACVLGIG DDPVTIKQIE
VTIINRAISD GSVVPVPPSV RTGRRVAVVG SGPAGLAAAQ QLTRAGHEVV VYERADRAGG
LLRYGIPEFK MEKRVLDNRL AQMEAEGTSF VTSCNVGVDI TADELRSSYD AVVLAGGSTV
GRDLPVPGRE LRGIHLAMEF LVPANRVQQG DLAETTISAA GKRVVIIGGG DTGADCLGTS
HRQGALSVHQ LEIMPRPPAS RPPANPWPSF PIVYRVSSAH EEGGERVFAV STERFVGDDE
GNVRALLMHE VQMVDGRFQK IEGSETELPC DLVLLAMGFV GPERPGLLEQ LGVDLDARGN
VARDLGWSTS VPGVFVAGDM GRGQSLIVWA IAEGRSAAAA VDRHLMGTTD LPAPILPTRR
P
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