Gene Franean1_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1914 
Symbol 
ID5670315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2295346 
End bp2296134 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID641240835 
Producthypothetical protein 
Protein accessionYP_001506257 
Protein GI158313749 
COG category[S] Function unknown 
COG ID[COG3361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.391996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCCGG ATCATCCCGG CCTGCCGGAT GGGCACGACT GGTCGGACCG GCCTGTCGTC 
GAGCCCAGCT GCCCGTTCAC CGTCGAGCGG CCCACGATGA CGCAGCGCTG GGAGCGGCTC
ACGTTCGTGC ACTGGCCCGT CGATCCCGAG GCCGTCAGCC GGCTGCTGCC CCCCGAACTC
TCCGCCGACA CCTACGACGA CCGGGCCTGG GTGAGCCTGG TGCCCTTCTA CATGCGCGTC
GCGACGCCCG GCGGGCGCGC CGTGCCCTGG GCGTCCCACT TCTGCGAGAC GAATGTCCGG
ACCTACGTCG TGGACCGGCG GGGCCGGCGC GGGATCTGGT TCTTCTCCCT GGAGGCCGCC
CGGCTCGGCG CAGTGCTGGT GGCGCGCACC GGCTTCCGCC TGCCGTACCT CTGGGCCTCG
ATGACGCTCA CCGAGACCGG CGGGCCGTCC GGGGGGCCGG GCGAGATCCG GTACGAGTGC
CGGCGCCGCT GGCCCGGCCC ACGGGGTACC TCGAGCCGGG TGCGCATCCG GCTCGGCCCG
CGCTACCAGC CCGGCGAGCT CGGCCCGCTC GACCACTTCC TCACGGCGCG CTGGATCGTG
TTCAGCTCGA CCGGATCTAG TCACCGCGCG GTGCGGGCCC ACCACGAGCC CTGGCCGCTG
TGGCGGGCCC ACCCGGAGGA GATCGACGAC GGTCTCGTCC GCGCCACCGG CCTGCTGCCG
CTGCCCGGCG AGCCACTGGC GCACTACTCA CCCGGGGTCG ACGTCCGGAT CGGCCGTCCG
GAACAGTAG
 
Protein sequence
MCPDHPGLPD GHDWSDRPVV EPSCPFTVER PTMTQRWERL TFVHWPVDPE AVSRLLPPEL 
SADTYDDRAW VSLVPFYMRV ATPGGRAVPW ASHFCETNVR TYVVDRRGRR GIWFFSLEAA
RLGAVLVART GFRLPYLWAS MTLTETGGPS GGPGEIRYEC RRRWPGPRGT SSRVRIRLGP
RYQPGELGPL DHFLTARWIV FSSTGSSHRA VRAHHEPWPL WRAHPEEIDD GLVRATGLLP
LPGEPLAHYS PGVDVRIGRP EQ