Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1914 |
Symbol | |
ID | 5670315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2295346 |
End bp | 2296134 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641240835 |
Product | hypothetical protein |
Protein accession | YP_001506257 |
Protein GI | 158313749 |
COG category | [S] Function unknown |
COG ID | [COG3361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.391996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCCGG ATCATCCCGG CCTGCCGGAT GGGCACGACT GGTCGGACCG GCCTGTCGTC GAGCCCAGCT GCCCGTTCAC CGTCGAGCGG CCCACGATGA CGCAGCGCTG GGAGCGGCTC ACGTTCGTGC ACTGGCCCGT CGATCCCGAG GCCGTCAGCC GGCTGCTGCC CCCCGAACTC TCCGCCGACA CCTACGACGA CCGGGCCTGG GTGAGCCTGG TGCCCTTCTA CATGCGCGTC GCGACGCCCG GCGGGCGCGC CGTGCCCTGG GCGTCCCACT TCTGCGAGAC GAATGTCCGG ACCTACGTCG TGGACCGGCG GGGCCGGCGC GGGATCTGGT TCTTCTCCCT GGAGGCCGCC CGGCTCGGCG CAGTGCTGGT GGCGCGCACC GGCTTCCGCC TGCCGTACCT CTGGGCCTCG ATGACGCTCA CCGAGACCGG CGGGCCGTCC GGGGGGCCGG GCGAGATCCG GTACGAGTGC CGGCGCCGCT GGCCCGGCCC ACGGGGTACC TCGAGCCGGG TGCGCATCCG GCTCGGCCCG CGCTACCAGC CCGGCGAGCT CGGCCCGCTC GACCACTTCC TCACGGCGCG CTGGATCGTG TTCAGCTCGA CCGGATCTAG TCACCGCGCG GTGCGGGCCC ACCACGAGCC CTGGCCGCTG TGGCGGGCCC ACCCGGAGGA GATCGACGAC GGTCTCGTCC GCGCCACCGG CCTGCTGCCG CTGCCCGGCG AGCCACTGGC GCACTACTCA CCCGGGGTCG ACGTCCGGAT CGGCCGTCCG GAACAGTAG
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Protein sequence | MCPDHPGLPD GHDWSDRPVV EPSCPFTVER PTMTQRWERL TFVHWPVDPE AVSRLLPPEL SADTYDDRAW VSLVPFYMRV ATPGGRAVPW ASHFCETNVR TYVVDRRGRR GIWFFSLEAA RLGAVLVART GFRLPYLWAS MTLTETGGPS GGPGEIRYEC RRRWPGPRGT SSRVRIRLGP RYQPGELGPL DHFLTARWIV FSSTGSSHRA VRAHHEPWPL WRAHPEEIDD GLVRATGLLP LPGEPLAHYS PGVDVRIGRP EQ
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