Gene Franean1_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1902 
Symbol 
ID5670303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2282249 
End bp2282740 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content73% 
IMG OID641240823 
Productthioesterase superfamily protein 
Protein accessionYP_001506245 
Protein GI158313737 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGAC CTGAGATGGA CTCGCCACGA GCGCCGAACC CCGATTTCGA GCGGGCCGTG 
ACGGACGCGG TCCTGAGCAT GCCGGCGGCC CGGCACCTCG GCTTCCAGGT CGGCAGGCTG
GCGCCGGGCG AGGCCGAGCT CGTCCAGCCG TACCGGGCGG GGCTGACCCA GCATGACGGG
TTCGTCCAGG GCGGCGTGCT GGGAGCGCTG GCGGACTTCG CCGGCGGGTG CGCGGCCGGC
ACGCTGCTGC CGGCTGGCTG GGCCAACATG ACCATCGACT ACACGGTCAA GATCGTGGCC
CCCGCGCGCG GGGAGCGGAT CGTCGCGCGC GGGCGCGTCA TCAAGGCGGG GCCGACCATC
AGCGTCGCCG CCGCCGACGT CTACAGCGTC TCGACCGCCC GCGGCCGGGA GGTCGAGACG
CTGTGCGCGA CCGCATTCGT CACTCTGCGC AACATCAGGG TCCCCGACCC GAGGAGGGGC
GCCGACCGGT GA
 
Protein sequence
MRRPEMDSPR APNPDFERAV TDAVLSMPAA RHLGFQVGRL APGEAELVQP YRAGLTQHDG 
FVQGGVLGAL ADFAGGCAAG TLLPAGWANM TIDYTVKIVA PARGERIVAR GRVIKAGPTI
SVAAADVYSV STARGREVET LCATAFVTLR NIRVPDPRRG ADR