Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1902 |
Symbol | |
ID | 5670303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2282249 |
End bp | 2282740 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641240823 |
Product | thioesterase superfamily protein |
Protein accession | YP_001506245 |
Protein GI | 158313737 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGAC CTGAGATGGA CTCGCCACGA GCGCCGAACC CCGATTTCGA GCGGGCCGTG ACGGACGCGG TCCTGAGCAT GCCGGCGGCC CGGCACCTCG GCTTCCAGGT CGGCAGGCTG GCGCCGGGCG AGGCCGAGCT CGTCCAGCCG TACCGGGCGG GGCTGACCCA GCATGACGGG TTCGTCCAGG GCGGCGTGCT GGGAGCGCTG GCGGACTTCG CCGGCGGGTG CGCGGCCGGC ACGCTGCTGC CGGCTGGCTG GGCCAACATG ACCATCGACT ACACGGTCAA GATCGTGGCC CCCGCGCGCG GGGAGCGGAT CGTCGCGCGC GGGCGCGTCA TCAAGGCGGG GCCGACCATC AGCGTCGCCG CCGCCGACGT CTACAGCGTC TCGACCGCCC GCGGCCGGGA GGTCGAGACG CTGTGCGCGA CCGCATTCGT CACTCTGCGC AACATCAGGG TCCCCGACCC GAGGAGGGGC GCCGACCGGT GA
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Protein sequence | MRRPEMDSPR APNPDFERAV TDAVLSMPAA RHLGFQVGRL APGEAELVQP YRAGLTQHDG FVQGGVLGAL ADFAGGCAAG TLLPAGWANM TIDYTVKIVA PARGERIVAR GRVIKAGPTI SVAAADVYSV STARGREVET LCATAFVTLR NIRVPDPRRG ADR
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