Gene Franean1_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1890 
Symbol 
ID5670292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2268700 
End bp2269599 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID641240812 
ProductDNA (cytosine-5-)-methyltransferase 
Protein accessionYP_001506234 
Protein GI158313726 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.221809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAAGC GGGCATATCG TTATCGCTTC TACCCGAATC CCGAGCAGGT CGCGCAGCTG 
GCCCGTACCT TCGGCTGTGT CCGCTACGTC TACAACCGGG CGCTGGCCGA ACGGTCCCGT
GCCTGGACCC AGGAGCGGCG CAGGGTCACG CACGCGGAGA CCGACAGGAT GCTCACCGTG
TGGAAGCGGG ACACGGAGAC GGCGTGGCTG GCCGAACCGT CGAAAGGGCC GCTGCAGGCC
ACGCCGCGCC ATCTGCAGAC GGCGTTCGTG AACTTCTGGG AAAAACGGGC CGGATATCCG
TCTTTCAAGA AGAAGGGCAG GAGCCTCGAT TCGGCGACCT ATTTCCGGAA CTGCTTCACC
TACCGGAACG GGAACATCAC ACTGGCCAAG CAGGACCGGC CGTTGGACAT CGTCTGGTCG
CGTCCGCTGC CCGAGGGCGC GACGCCCTCG CGGGTGACGG TGTCGCGGAA CGCCCGCGGC
CAGTACCACG TCTCGATCCT GGTCGAGGAC ACCGTCACCA GCCTCCCGCC GGCTGGGGGG
CAGGTCGGGA TCGACGCGGG CATCACAGCG CTGGTCACCT TGTCGACCGG GGAGAAAGTC
ACCAACCCCC GGCACGAGCG CCGCGACCGT GTCCGGCTGG TGCGGGCGCA GCGGGACCTG
TCCCGCAAGG CGAAGGGCTC GGCGAACCGG GTGAAGGCCC GCGCGAGGGT CGCGGAGATT
CACGGCAGGA TCGCGGATCG GCGCCGGGAT CATCTACACA AGCTGTCCAC GAGGATCATC
CGCGAGAACC AAACGGTGGT CGTCGAGGAC CTGTCCGTCC GCACCATGGT CCGCAACCAC
TCGCTGGCCC GGGCTATCAG TGAGACCACC TCGCTCCTGA AGCGAGGAGG CGTCCGTTGA
 
Protein sequence
MVKRAYRYRF YPNPEQVAQL ARTFGCVRYV YNRALAERSR AWTQERRRVT HAETDRMLTV 
WKRDTETAWL AEPSKGPLQA TPRHLQTAFV NFWEKRAGYP SFKKKGRSLD SATYFRNCFT
YRNGNITLAK QDRPLDIVWS RPLPEGATPS RVTVSRNARG QYHVSILVED TVTSLPPAGG
QVGIDAGITA LVTLSTGEKV TNPRHERRDR VRLVRAQRDL SRKAKGSANR VKARARVAEI
HGRIADRRRD HLHKLSTRII RENQTVVVED LSVRTMVRNH SLARAISETT SLLKRGGVR