Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1890 |
Symbol | |
ID | 5670292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2268700 |
End bp | 2269599 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641240812 |
Product | DNA (cytosine-5-)-methyltransferase |
Protein accession | YP_001506234 |
Protein GI | 158313726 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.221809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTGAAGC GGGCATATCG TTATCGCTTC TACCCGAATC CCGAGCAGGT CGCGCAGCTG GCCCGTACCT TCGGCTGTGT CCGCTACGTC TACAACCGGG CGCTGGCCGA ACGGTCCCGT GCCTGGACCC AGGAGCGGCG CAGGGTCACG CACGCGGAGA CCGACAGGAT GCTCACCGTG TGGAAGCGGG ACACGGAGAC GGCGTGGCTG GCCGAACCGT CGAAAGGGCC GCTGCAGGCC ACGCCGCGCC ATCTGCAGAC GGCGTTCGTG AACTTCTGGG AAAAACGGGC CGGATATCCG TCTTTCAAGA AGAAGGGCAG GAGCCTCGAT TCGGCGACCT ATTTCCGGAA CTGCTTCACC TACCGGAACG GGAACATCAC ACTGGCCAAG CAGGACCGGC CGTTGGACAT CGTCTGGTCG CGTCCGCTGC CCGAGGGCGC GACGCCCTCG CGGGTGACGG TGTCGCGGAA CGCCCGCGGC CAGTACCACG TCTCGATCCT GGTCGAGGAC ACCGTCACCA GCCTCCCGCC GGCTGGGGGG CAGGTCGGGA TCGACGCGGG CATCACAGCG CTGGTCACCT TGTCGACCGG GGAGAAAGTC ACCAACCCCC GGCACGAGCG CCGCGACCGT GTCCGGCTGG TGCGGGCGCA GCGGGACCTG TCCCGCAAGG CGAAGGGCTC GGCGAACCGG GTGAAGGCCC GCGCGAGGGT CGCGGAGATT CACGGCAGGA TCGCGGATCG GCGCCGGGAT CATCTACACA AGCTGTCCAC GAGGATCATC CGCGAGAACC AAACGGTGGT CGTCGAGGAC CTGTCCGTCC GCACCATGGT CCGCAACCAC TCGCTGGCCC GGGCTATCAG TGAGACCACC TCGCTCCTGA AGCGAGGAGG CGTCCGTTGA
|
Protein sequence | MVKRAYRYRF YPNPEQVAQL ARTFGCVRYV YNRALAERSR AWTQERRRVT HAETDRMLTV WKRDTETAWL AEPSKGPLQA TPRHLQTAFV NFWEKRAGYP SFKKKGRSLD SATYFRNCFT YRNGNITLAK QDRPLDIVWS RPLPEGATPS RVTVSRNARG QYHVSILVED TVTSLPPAGG QVGIDAGITA LVTLSTGEKV TNPRHERRDR VRLVRAQRDL SRKAKGSANR VKARARVAEI HGRIADRRRD HLHKLSTRII RENQTVVVED LSVRTMVRNH SLARAISETT SLLKRGGVR
|
| |