| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1888 |
|---|
| Symbol | |
|---|
| ID | 5670290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2266022 |
|---|
| End bp | 2266942 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641240810 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506232 |
|---|
| Protein GI | 158313724 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4696] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.965318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTTCCC TCCCGGACCG GCCGGCGGTG CCTGACCCCA CGCTTCCCGT GGCGGCGATC
GACGCCGCCG TGCGCGTGCT GGACTTGAAC GACGCGCGCA ACGGGATCGA GCCCCGTGAG
GGCCTGGCGT TGCGGATCCT GAAGCTGGTC GAGGAGTGCG GGGAGGCGAG CGCCGCCCTG
ATCGGCCTGC GCGGCCAGAA CCCGCGCAAG CCGCGTTCCT CCGAGCAGGA TCTGGTGGAC
GAGCTTCTCG ACGTCGCGCT CGCCGCCCTG GTCGCGGCGG CGTCGCTGAC CGATTCCTGG
GCCGGGAGGT TCTGCGATCA GGTGCTGGCC AAGACGTCGC GGCTGGTCGC GGCGGTACCA
GGGGAGCCAG GGGCGGCGTC ACCGGCACCG GGCGCGGTGC CACCGGTGCC ACCGGCGGCG
CCGGCCGTGG CGCCGGGTGT CGACCCCGGT GGTGATCCCG GCCGGCCGGC TGGCCGTGGA
CGCGGCATCC CCACCGCGCC GTCCGTCATG GCGATGGTGC GGGAGTTCCA CGGCGCGCTG
GGTGACGACC TGCCGGGCTC GCCGCGTCTC CAGGATGCGG CGACCCGCCG GCTGCGGCGC
GAGTTCCTGG CCGAGGAGGC CGCGGAGGCC GTCGCCGCCG ATGAGAACGA CGACCTCGTC
GGCCTCGCCC AGGAGCTGGC CGACGTCGTG TACGTCGCTT ACGGCACGGC CGCCCGGTAC
GGGATCCCGC TCGACGCGGT CCTCGCCGAG ATCCACCGCG CGAACCTGAC GAAGGAGGCG
CATCCCGCCG GCGGCAAGGC GGTCAAGGGC CCGACGTTCC GACCGGCGGA CGTCGCCGCT
GTCATGGGCT TCACACCCGC GGCACCCGCG GAGGTCGGTG GGCCGGCCGG GCGAGCCGTC
GACGAGCGCG TCGAGCCGTA G
|
|---|
| Protein sequence | MISLPDRPAV PDPTLPVAAI DAAVRVLDLN DARNGIEPRE GLALRILKLV EECGEASAAL
IGLRGQNPRK PRSSEQDLVD ELLDVALAAL VAAASLTDSW AGRFCDQVLA KTSRLVAAVP
GEPGAASPAP GAVPPVPPAA PAVAPGVDPG GDPGRPAGRG RGIPTAPSVM AMVREFHGAL
GDDLPGSPRL QDAATRRLRR EFLAEEAAEA VAADENDDLV GLAQELADVV YVAYGTAARY
GIPLDAVLAE IHRANLTKEA HPAGGKAVKG PTFRPADVAA VMGFTPAAPA EVGGPAGRAV
DERVEP
|
|---|
| |