Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1888 |
Symbol | |
ID | 5670290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2266022 |
End bp | 2266942 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641240810 |
Product | hypothetical protein |
Protein accession | YP_001506232 |
Protein GI | 158313724 |
COG category | [S] Function unknown |
COG ID | [COG4696] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.965318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTTCCC TCCCGGACCG GCCGGCGGTG CCTGACCCCA CGCTTCCCGT GGCGGCGATC GACGCCGCCG TGCGCGTGCT GGACTTGAAC GACGCGCGCA ACGGGATCGA GCCCCGTGAG GGCCTGGCGT TGCGGATCCT GAAGCTGGTC GAGGAGTGCG GGGAGGCGAG CGCCGCCCTG ATCGGCCTGC GCGGCCAGAA CCCGCGCAAG CCGCGTTCCT CCGAGCAGGA TCTGGTGGAC GAGCTTCTCG ACGTCGCGCT CGCCGCCCTG GTCGCGGCGG CGTCGCTGAC CGATTCCTGG GCCGGGAGGT TCTGCGATCA GGTGCTGGCC AAGACGTCGC GGCTGGTCGC GGCGGTACCA GGGGAGCCAG GGGCGGCGTC ACCGGCACCG GGCGCGGTGC CACCGGTGCC ACCGGCGGCG CCGGCCGTGG CGCCGGGTGT CGACCCCGGT GGTGATCCCG GCCGGCCGGC TGGCCGTGGA CGCGGCATCC CCACCGCGCC GTCCGTCATG GCGATGGTGC GGGAGTTCCA CGGCGCGCTG GGTGACGACC TGCCGGGCTC GCCGCGTCTC CAGGATGCGG CGACCCGCCG GCTGCGGCGC GAGTTCCTGG CCGAGGAGGC CGCGGAGGCC GTCGCCGCCG ATGAGAACGA CGACCTCGTC GGCCTCGCCC AGGAGCTGGC CGACGTCGTG TACGTCGCTT ACGGCACGGC CGCCCGGTAC GGGATCCCGC TCGACGCGGT CCTCGCCGAG ATCCACCGCG CGAACCTGAC GAAGGAGGCG CATCCCGCCG GCGGCAAGGC GGTCAAGGGC CCGACGTTCC GACCGGCGGA CGTCGCCGCT GTCATGGGCT TCACACCCGC GGCACCCGCG GAGGTCGGTG GGCCGGCCGG GCGAGCCGTC GACGAGCGCG TCGAGCCGTA G
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Protein sequence | MISLPDRPAV PDPTLPVAAI DAAVRVLDLN DARNGIEPRE GLALRILKLV EECGEASAAL IGLRGQNPRK PRSSEQDLVD ELLDVALAAL VAAASLTDSW AGRFCDQVLA KTSRLVAAVP GEPGAASPAP GAVPPVPPAA PAVAPGVDPG GDPGRPAGRG RGIPTAPSVM AMVREFHGAL GDDLPGSPRL QDAATRRLRR EFLAEEAAEA VAADENDDLV GLAQELADVV YVAYGTAARY GIPLDAVLAE IHRANLTKEA HPAGGKAVKG PTFRPADVAA VMGFTPAAPA EVGGPAGRAV DERVEP
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