| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1880 |
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| Symbol | |
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| ID | 5670282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2259119 |
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| End bp | 2260126 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240802 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001506224 |
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| Protein GI | 158313716 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.615524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGC GAGTCACCAT CGGTGACGTC GCCGCGCACG CCGGCGTCTC CACGGCGACG
GTCTCCCGCG TGCTCAACGG GGGCGCCGTC ACCGAGGCGA CCGCGACCCG GGTGCGGGAG
GCGGTCACCG CGCTGGAGTA CAGCCCCAAC GCGCTCACCA GAAGTATCTT CGCCGGTCGC
TCCAGCACGA TCGGTGTTGT CATCCGTGAC CTGAGCAGCC CCTTCTACCT CGACCTGATC
CGTGGCATCG ACGACGTGGC CGCCGCCAAC GACAGCCTCG TCATGCTCGC CAACACGTTC
CGCCAGGCCG ACCATGAAAT CGCGCTCGTC AGGATGATGG ACGAGCACCG GGTGCGCGGC
CTGATCGTGA CCGCCGGCGA GCAGACCGAC AGCCGCACCC GCCGCATGGC CGAGACCGGC
ACGCCGTGCG TGATCGTCGC GCGTACCGTG CGGGACCCTC CGCCCGACCT GCATGCCGTC
AGCCTCGACA ACGTCGGGGC CGGTCGTCTG ATGGCCAGGC ATCTGGTCGG GTGCGGGCGG
TCGTCCGTCG GGGTCGTCAC CTCCGGGAGC CGCCCGTCCC AGCTCGAGCG CACGGCGGGG
CTGCGGAAGG CGCTCATCGA GCTCGGACGT CCGCTGCCCG CGGACGCGGT GGCCGTCGCC
GAGACGGCGG AAGAGGCCGA CCATGCTGTC GGCACGCTCC TCGCGCGCGC ACATGCTCGC
GGAACGCCGT TGGACGCGGT CGCCTGCGCC ACGGGCCGCC TGACCGTCGC CGCGTACTCG
GCGCTCACGG CTCGCGGCCT CGCCATTCCC GACGACATCG CGTTCGTGAC GATGGACGAC
TTTCCCTGGG CCACCGCGCT CGGGATCACC GTGATCACCC AGCCCTCGTA CGAGATGGGC
CGGCGGGCAG CCGAGCTCGT CGTCGAACGC CCCGGTGAAG CGGTCAGCAT CGTCTTCGAG
CCGATGCTGG TCGCCCGCGG CTCCGCCGGC GAGAGAAACA GTCCGTGA
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| Protein sequence | MAKRVTIGDV AAHAGVSTAT VSRVLNGGAV TEATATRVRE AVTALEYSPN ALTRSIFAGR
SSTIGVVIRD LSSPFYLDLI RGIDDVAAAN DSLVMLANTF RQADHEIALV RMMDEHRVRG
LIVTAGEQTD SRTRRMAETG TPCVIVARTV RDPPPDLHAV SLDNVGAGRL MARHLVGCGR
SSVGVVTSGS RPSQLERTAG LRKALIELGR PLPADAVAVA ETAEEADHAV GTLLARAHAR
GTPLDAVACA TGRLTVAAYS ALTARGLAIP DDIAFVTMDD FPWATALGIT VITQPSYEMG
RRAAELVVER PGEAVSIVFE PMLVARGSAG ERNSP
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