| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1878 |
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| Symbol | |
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| ID | 5670280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2256400 |
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| End bp | 2257539 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240800 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001506222 |
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| Protein GI | 158313714 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.386717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA ACGTGGTCGT CATCGGTGCC GGTGCCTACG GCGCGGCGGT CGCCGCCTCG
CTGGCGCGCC GCGGTGCCCG GGTCGTCATC GTGGAGGCCG GCGCTCCCGC GGGCGGCACC
TCCGGCGCGA CGTTCGCCTG GATCAACGCC TCCAGCAAGC AGTCACACCC GTACCACGCT
TTCGGGGTCG CGGCGATGGA CGCCCACCGC AGGCTGGCGG CCGAGACGCC CGCCGGCGAC
TGGTACCACG AGTCCGGCAA CCTACAGTGG GAGACCGCCG ATGCCGAGCA CGAGGTGCTG
CGCCGGAAGG TCGCCACCGT CGTCGCCTAC GGGTACGAGG TGCGCTGGCT CAGCCGGGCC
GAGGCGCTGA AGCTCGAACC GGACGTGGAT CCCGCCGCGC TTCCGGCGGA CGAGATCGCC
TACTTCCCGC GGGAGGGGTG GGTCGAGCCG GCCCGCCTGG TCGGCCACCT GCTCTCGAGG
GCGGTGTCCC GGGGCGCCGA GCTGGTGACC GACGACCCGG TCGTCAGCCT GCGGATCGCC
GCTGGACTGG TACGTGCCGT GGGCCTCGCC TCGGGTCGCT CGATCTCCGC GGGCGCGGTC
GTGAACTGCG CGGGGCCGCG CGCCGGCGCG ATCGCCGTGC TCGCCGGCCT GGATCTGCCG
ATGCGCAACA CCCACGGCGT GCTCGTCCAC ACCTCCCCGG TCACCGTCTC GGCATCCCGC
GTCATCCACG CGCCGGACGT CCACCTGCGG CCGGACGGGG GCGGACGGCT GCTGCTGCAC
ACCCAGGCGA TCGACGGCGC GGTGCGTATT TCCGGCAACG GTGAAATGAG CGCGGACGGA
TCGGCGGTCG AGACGATCCT CGAGGCGAGC CGGGTGCTCT ACCCGGGAAT CCGGGCGGCG
ACGGTGGAGA AGGTCCGGAT CGGTGAACGG CCCATTCCCG GGGACGGCCT ACCCGTGCTG
GGGCGGGCGG TCGAGCTGCC CAACTTCCAT TTCGCCGTCT CGCACAGCGG TGTGACCCTG
AGCGTGCACG CCGGTGACCT GGTCGCGGCG GAGGTGATGG GGGAGGACCA CAGCGACGAG
CTCGCTGCCT TCCGGATCGA GCGGTTCCGG CCGGGCGGCC CGGTGAGGGC GGCTCGGTGA
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| Protein sequence | MAENVVVIGA GAYGAAVAAS LARRGARVVI VEAGAPAGGT SGATFAWINA SSKQSHPYHA
FGVAAMDAHR RLAAETPAGD WYHESGNLQW ETADAEHEVL RRKVATVVAY GYEVRWLSRA
EALKLEPDVD PAALPADEIA YFPREGWVEP ARLVGHLLSR AVSRGAELVT DDPVVSLRIA
AGLVRAVGLA SGRSISAGAV VNCAGPRAGA IAVLAGLDLP MRNTHGVLVH TSPVTVSASR
VIHAPDVHLR PDGGGRLLLH TQAIDGAVRI SGNGEMSADG SAVETILEAS RVLYPGIRAA
TVEKVRIGER PIPGDGLPVL GRAVELPNFH FAVSHSGVTL SVHAGDLVAA EVMGEDHSDE
LAAFRIERFR PGGPVRAAR
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