Gene Franean1_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1862 
Symbol 
ID5670264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2238432 
End bp2238869 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content69% 
IMG OID641240783 
Producthypothetical protein 
Protein accessionYP_001506206 
Protein GI158313698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0102357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCGA CCGCGGCGAA CGCCGAGGGT CAGCGCCGTG CGGAACGTCT GGGAGTCATG 
GCCGGCACCT TGGTCCAGTC GCTCAACGAG GACGACGACA TCGCCCAGGA TCTCCTGGAC
GCGGTCACGA CCTCGAGTGG CACCGACCTC GTCCCGGAGG ACTCCGACGA CGTGGTAGAC
GTCGTGCTCC TCTGGTGGCG CGAGGATGAC GGTGATCTTG CCAACGCCCT CATTGACGCG
CGTAGGCAGT TGTCCGAGGA CGGCGTGATC TGGCTGCTTA CCCCGAAGGC TGGCCGTGAC
GGCCACGTCG AGCCCAGCGA CGTCCTGGAC GCCGTGCCGA CCGCCGGCCT CGTCCAGACC
AGCACCGTCA GCGTCGCGGC CGAATGGGCC GGAATGCGGC TGGCCGCCCC GAAGTCCCAG
CGGGTCCGCC ACCGCTGA
 
Protein sequence
MSPTAANAEG QRRAERLGVM AGTLVQSLNE DDDIAQDLLD AVTTSSGTDL VPEDSDDVVD 
VVLLWWREDD GDLANALIDA RRQLSEDGVI WLLTPKAGRD GHVEPSDVLD AVPTAGLVQT
STVSVAAEWA GMRLAAPKSQ RVRHR