Gene Franean1_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1831 
Symbol 
ID5670233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2197378 
End bp2197914 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content73% 
IMG OID641240752 
Producthypothetical protein 
Protein accessionYP_001506175 
Protein GI158313667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.174475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGCC GTTTCTTCTA CGACACCGAG TTCATCGAGC GCGACGACGG CGGCCATCAC 
TGGCTCGACC TGGTCAGCAT CGGGATCGTC AGCGAGGACG GGACGAGGGA GCTCTACGCC
GTCTCGACGG AGTTCGACCC CTCGCGCGCC GTCCCCTGGG TGCGCCGCAA CGTCCTGGAC
CGCCTGCCAT CGCCGTCCAG CCCGGCCTGG ATGTCGCGGG AGCGGATCCG GGACGAGGTG
GCGCAGTTCC TCACGGCGGA CGGCTCGCCG GAGCTGTGGG CCTGGTACGC CGCCTACGAC
CATGTCGTGC TCTGCCAGCT CTTCGGGAAG ATGCCCGCGC TGCCGCGCCG GTTGCCGCGG
TTCACCCGAG ACCTGCGCCA GCTCTGGGAG GACGTCGGCA GCCCCAGCCT GCCCCCGCCG
CCGCCCGACG CGCACGACGC GCTGGCCGAC GCGCGGCACA ACCTGGCCCG CTGGGCCGTC
CTCGCGCCGC TGCGTGCCGA GCTCGCCCCG AAGGCGCCCG GGCACTCCAC CAACTGA
 
Protein sequence
MGGRFFYDTE FIERDDGGHH WLDLVSIGIV SEDGTRELYA VSTEFDPSRA VPWVRRNVLD 
RLPSPSSPAW MSRERIRDEV AQFLTADGSP ELWAWYAAYD HVVLCQLFGK MPALPRRLPR
FTRDLRQLWE DVGSPSLPPP PPDAHDALAD ARHNLARWAV LAPLRAELAP KAPGHSTN