Gene Franean1_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1776 
Symbol 
ID5670178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2133075 
End bp2133917 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content77% 
IMG OID641240697 
Productpeptidase S51 dipeptidase E 
Protein accessionYP_001506120 
Protein GI158313612 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.125751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.183168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAACT TCCTCTCGAG CGGCGGCGGC GCGCCGCCGG GCGCGGACGG GCGCCCCGGG 
ACGCTTCCGG GGCCGGTCAA CCAGGAGTCA TCTGTGCAGA TCCTCGCGAC GAGCGGCGGC
TTCCGGCCCG ACGGGCGGTG GGGCGCCCGG GTCGGACCAC TGCTGGATCA CGCGATCGAG
CTCGCCGCCC CCGCCGGACG TCCCAGGCTG TGCCTGTTGC AGACCGCCCT GGGCGACGAC
CAGGCCGCCT ACGCCCGCGG GTACGCGGCG CTGAGCCGGG ACCGGCCGGA CGTCGTGGTC
TCCCACCTTG CGCTGTTCCC GATGCCCAAC GTCGCCGACG TCCGGGCCCA CCTGCTCGCG
CAGGACGTCG TCTGGGTCGG CGGCGGCAGC GTGGCCAACC TGCTGGCCGT GTGGCGGGCG
CACGGCCTGG ACCGGATCAT GCGCGAGGTG TGGGAGGCCG GGGTCGTGCT GGGCGGGGTC
TCCGCCGGCT CGCTGTGCTG GCACACCGGC GGCACCACCG ACTCGTTCGG CCCCGACCTG
CGCCCGGTGA CGAACGGGCT GGGCCTGTTG CCGCACAGCA ACACCCCACA CTACGACTCC
GAGCCCGCGC GCCGGCCGCT CTACCAGCGC CTCGTCGCCG AGGGGACGCT GCCCGCCGGG
TGGGCGACCG ACGACGGCGC CGGCCTGCAC TTCCGCGGCA CCGAGCTCGT CGAGGCGGTG
GCCGACCGGC CGGACGCCCA CGCCTGGCGG GTCAAGCCGG GCCCGGCCGG GACGGCCGTC
GAGACCCGGG TCCCGGCCAG GCTCCTCCCC GATCCGCGGA CCGCGGCGGA CCAGGCGCCG
TAG
 
Protein sequence
MDNFLSSGGG APPGADGRPG TLPGPVNQES SVQILATSGG FRPDGRWGAR VGPLLDHAIE 
LAAPAGRPRL CLLQTALGDD QAAYARGYAA LSRDRPDVVV SHLALFPMPN VADVRAHLLA
QDVVWVGGGS VANLLAVWRA HGLDRIMREV WEAGVVLGGV SAGSLCWHTG GTTDSFGPDL
RPVTNGLGLL PHSNTPHYDS EPARRPLYQR LVAEGTLPAG WATDDGAGLH FRGTELVEAV
ADRPDAHAWR VKPGPAGTAV ETRVPARLLP DPRTAADQAP