| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1752 |
|---|
| Symbol | ppnK |
|---|
| ID | 5670154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2101138 |
|---|
| End bp | 2102025 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641240673 |
|---|
| Product | inorganic polyphosphate/ATP-NAD kinase |
|---|
| Protein accession | YP_001506096 |
|---|
| Protein GI | 158313588 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0180001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000623558 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG AGGTGCTCGT CGTCAGCCAC CCGCGCCGTT CCGTTGTACG GGAGAGCGCG
CAGCGCGTGC TGGAGATGCT CGTGGCCGCC GGTGTCTCCC CGCGGGTCCT GCAGGACGAG
GCCGAGCTGC TCGACCTGTC GGCGCCGAAC GTGGTCACGG GGGACACCGA CGCCGCGGTC
GGCGCCGAGC TGGTGCTCGT GCTCGGTGGT GACGGCAGCC TGCTGCGCGG CGCCGAGTTC
GCCCGCTCGG CGGACATCCC GCTGCTCGGG GTCAACCTCG GGCACGTGGG CTTCCTGGCC
GAGGCGGAGC CCGACGCGCT GGAGGCCACC GTCGAGCACG TCGTCCGCAA GGAGTACTCG
GTCGAGGAGC GGATGACCGT CGACGTGACG GTGCGCCACC GTGGCGAGCT CATCTACACC
GGCTGGGCGC TCAACGAGAT GTCGCTGGAG AAGGCCGGGC GGGCCCGGAT GCTCGAGTGT
GTCCTGGAGA TCGACGGGCG GCCGCTGTCG CGCTGGGGCT GTGACGGCGT GATCTGCTCG
ACGCCGACCG GGTCGACCGC GTACGCGTTC TCGGCGGGCG GCCCGGTGAT GTGGCCGGGG
GTGGAGTCGC TGCTGGTGGT GCCGATCAGC GCGCACGCGC TGTTCGCCCG GCCGCTGGTG
CTCACCCCGA CGTCGACCGT GGCCATCGAG GTGCTGCCGG ACGTCCCGGC GGTGCTCTAC
TGCGACGGGC GGCGACTGGT CGACGTCCCC GAGCTGTCGC GGGTGGAGGT GGTGCGGGGC
CGGCGCCCGG TGCGGCTGGC GGTAATCAGG CCACGTCCGT TCACCGATCG GCTGGTGGCC
AAGTTCGACC TGCCGGTGGT GGGGTGGCGC GGCCGCTCGG GGCGCTGA
|
|---|
| Protein sequence | MTREVLVVSH PRRSVVRESA QRVLEMLVAA GVSPRVLQDE AELLDLSAPN VVTGDTDAAV
GAELVLVLGG DGSLLRGAEF ARSADIPLLG VNLGHVGFLA EAEPDALEAT VEHVVRKEYS
VEERMTVDVT VRHRGELIYT GWALNEMSLE KAGRARMLEC VLEIDGRPLS RWGCDGVICS
TPTGSTAYAF SAGGPVMWPG VESLLVVPIS AHALFARPLV LTPTSTVAIE VLPDVPAVLY
CDGRRLVDVP ELSRVEVVRG RRPVRLAVIR PRPFTDRLVA KFDLPVVGWR GRSGR
|
|---|
| |