Gene Franean1_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1703 
Symbol 
ID5670105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2035274 
End bp2035681 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content72% 
IMG OID641240621 
ProductNusB antitermination factor 
Protein accessionYP_001506047 
Protein GI158313539 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.747293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0502801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGG CGCGGGCGAT GGAGACCCTT GCCGCGCACC GGGCGCAGGC CGACCCGCCG 
GTGCCGGACT ACACCTCGGA CCTCGTCGAG GGCGTGGTGG CCCACCTGGC CGAGATAGAC
GCGCACATCG CCCGGTTCGC CCAGGGCTGG ACACTGGACC GGATGCCCCC GGTGGACCGG
AACATCCTCC GGATCGCGGT GCTGGAGCTG TTCTGGCGTT CCGACGTGCC GGACCGGGTC
GTGATCGACG AGGCGGTGCG GCTGGCCAAG ACGATCTCCA CTGAGCGGTC GCCGGCATTC
GTCAACGGCC TGCTGGCGAG CCTGCTCAAG GAGAAACCGG TGCCGGAGGG AAGCCCTCGG
GCAGCCGGGG CGGCTGAGGC CGTGGGCGGC GAGTCGGCCG AGGCCTGA
 
Protein sequence
MRSARAMETL AAHRAQADPP VPDYTSDLVE GVVAHLAEID AHIARFAQGW TLDRMPPVDR 
NILRIAVLEL FWRSDVPDRV VIDEAVRLAK TISTERSPAF VNGLLASLLK EKPVPEGSPR
AAGAAEAVGG ESAEA