Gene Franean1_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1669 
Symbol 
ID5670071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1995947 
End bp1996477 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content72% 
IMG OID641240587 
Productputative thioredoxin-disulfide reductase 
Protein accessionYP_001506013 
Protein GI158313505 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.760569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTAC ACCAGGCTCT TCTCCGGCGG CAGTGGAGCG AAGACGTCGT CCTGTTCCCC 
CACACCGGTC CCGACCCCAC GGCCGAGGAG GCCGAGCAGC TCGCCGCCCG CAGCATCCGA
GTCGTGCCCG GTGCCGTCGA GGCCCTCGAG ACCGCGAACG ACCGCCTCGA ATCCGTCCGA
CTGCACCACG GGGAGGTGTT TCCCCGCCGG GCCCTGGCGG TCGCGCCGCG CTTCACCACC
CGCACCGCGA TACTCGGTGC GCTCGGCCTG GAATCAACCG ACCTGGCCCT GAACGGCCAC
GTGATCGGCC GACAGGTGCA GTCGGACCCC ACCGGCGCGA CCCAGGCCGC CGGGGTGTGG
ATCGCGGGAA ACGTGGCAGA CGTGGTGGCC TCAGTGATCA CGGCGTCCGC CGCCGGCGTG
AAGGCTGCCG CCGCCCTCAA CGCGGACCTG ATCGCCGAAA AGATTCGCCT CGCTGTGGCG
GCACGGCGGA CGGGCTGCGT TCCGAGCGGC TGGCCTGCCT TCAACGGCTG A
 
Protein sequence
MAVHQALLRR QWSEDVVLFP HTGPDPTAEE AEQLAARSIR VVPGAVEALE TANDRLESVR 
LHHGEVFPRR ALAVAPRFTT RTAILGALGL ESTDLALNGH VIGRQVQSDP TGATQAAGVW
IAGNVADVVA SVITASAAGV KAAAALNADL IAEKIRLAVA ARRTGCVPSG WPAFNG