| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1666 |
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| Symbol | |
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| ID | 5670068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1992942 |
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| End bp | 1994939 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240584 |
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| Product | ABC transporter related |
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| Protein accession | YP_001506010 |
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| Protein GI | 158313502 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.600713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGGCC CGTGTCTGTC GGGCGGGCCG GTGGACGTCC CGTCGACCAG GGTGACCCGC
CTGCACGCCC GGGTGGTGGC GAAGCTCACC GGCGTCGACG AGTCCGCCCG CAGCCTGCGC
TTCTTCGCCG ACCAGGGCCG GGTGATCACC ACCCTGGTCG GCCTGTCGGT CATCGGCTCG
GTCGCGGTCG CGGCCGGCCC GTTCCTGCTG CGCCACCTCA TCGACGACTC CCTGCCGACC
GGACAGGTCG GCGACCTCGT CGTCCCGGTG CTCCTCCTGT GCGCGCTGCT GGTGTTCGAG
TCGGCAGTGC TCGCCACCCG GATGGCGCTC ATCGCCCGGC TCGGCGCCGT GATCACGGTG
CGGACCCGGC AGGCCGTCAA CGCCCACCTG CAACGCCTGC CGTTCGGCTT CTTCCCCCGC
AGCCAGCAGG GCGAGGTGAT GACGGTGATG TCCACCGACG TCATCACCGC CCAGTACGCG
ATCTCCGCGG TCGTCCAGGC GGTGATCTGC CGGGTCGCTG ACATCGCCGT CGGCACCGCC
GTCGTCTTCG TGCTGGACTG GCGGCTCAGC CTGGCGGTCA TGGTCTTCGC CCCCGCCACA
CTGCTGATCA TGAAGTCCGG CCGCCGCCGC CTCGCCGGCA TCTCCCACCG CCAACGAGAG
CTGGACGGCC AGCTCATGGC CCAGGTGGCG GACACCTCCT CGGTCTCGGG TGCGCTGCAC
GTCCGGCTGT TCGACCGGGC GGACCATGAA TGCGAACGCT TCGACGCCGC CGCCGCCGAG
CTGCTCGCCG CCAGCCGTGA GCAGGCCCGG CTGACCTCGC GTGTCCGCCT CGTCGTCAAC
CTCGGCATCG TCATGACGAT GACGGTGGTC GTTACCCTCG GCGCCTGGCT GGTCTCCACG
GGACACACCT CGCTCGGGAC GGTCGCCGCG CTCGGCGGCG CACTCCTGGT CTCCTTCGGC
CCGCTCGCCT CCGCCGTCGA GCTCCGCTCC GAGCTCTCCA GCGCCGGCGC GTCATTCCGC
CGGATCTTCG CCCTGCTCGA CCTCCCAGTG GCCGCGGCCC GCCCGGTGGC CACAGCCCGC
CCCGTCGACC CTGCACGCCC GCCGCTCCAG CAGCGCCCGC CGGCCCAGCT GCGCACGGTG
GACCGACAGC CTGCGACGGT CGAGCACCGT CCGCGGGTCC CCGTCGCCTC GGTGCCGGAC
CTCACCCTTG ACGACGTCTG GTTCTCCTAC GACATCGCCA CCTCCGACCC ACGCCTCACC
GCCCCGGATC GCCCCGCCGC GCTGGATCGC CCCACCACAC CGGATCGCGA CGACGCGGCG
TGGAACCTGC GCGGTGTCAC CCTGCGGGTT GCTCCGGGGG CGACGACCGC GGTCGTCGGG
GCGAGCGGCG CCGGCAAGAC GACCATCACC TACATCGCCA GCGGCATCCA CCGCCCCCAG
CACGGCACCA TCCGGCTCGG CGGCGTGGCC TTGGACGACA TTCCGTCATC CGAGCTGCAT
TCGCTGATCG GGGTGGTTCC CCAGGACCCG CACCTGTTCC ACGACACCAT CGCGGCGAAC
CTGCGCTACG GACGGCTCGA CGCCACTGAC GACGAGCTGC GCGACGCGCT CGACGCCGCC
AACCTCTCGG CGCTGCTCAA CCAGCTGCCG GACGGGCTGC GCACCCGTGT CGGCGCTCGC
GGCTACCGGC TTTCCGGCGG CGAGCGTCAA CGGCTCGCCA TCGCCCGGGT CCTGCTGCAG
TCGCCCCAGG TGCTGATCCT GGACGAGGCC ACCTCGGCGC TGGACACCGT CTCCGAGGCG
GCCGTCCGCG CCGCGCTCGA CCGGCTCTCG GTCGGCCGGA CCTGCCTGGT CATCGCGCAC
CGGCTCTCCA CCGTGATCGA TGCCGACCGC ATCTACGTCA TGGACCACGG CCGGGTGGTC
GAGGACGGCA CCCACGGCGA GCTGCTCGCC GATGATGGCG CCTACGCCCG CCTGTACCGC
CCGGTCACGG TGGGCTGA
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| Protein sequence | MSGPCLSGGP VDVPSTRVTR LHARVVAKLT GVDESARSLR FFADQGRVIT TLVGLSVIGS
VAVAAGPFLL RHLIDDSLPT GQVGDLVVPV LLLCALLVFE SAVLATRMAL IARLGAVITV
RTRQAVNAHL QRLPFGFFPR SQQGEVMTVM STDVITAQYA ISAVVQAVIC RVADIAVGTA
VVFVLDWRLS LAVMVFAPAT LLIMKSGRRR LAGISHRQRE LDGQLMAQVA DTSSVSGALH
VRLFDRADHE CERFDAAAAE LLAASREQAR LTSRVRLVVN LGIVMTMTVV VTLGAWLVST
GHTSLGTVAA LGGALLVSFG PLASAVELRS ELSSAGASFR RIFALLDLPV AAARPVATAR
PVDPARPPLQ QRPPAQLRTV DRQPATVEHR PRVPVASVPD LTLDDVWFSY DIATSDPRLT
APDRPAALDR PTTPDRDDAA WNLRGVTLRV APGATTAVVG ASGAGKTTIT YIASGIHRPQ
HGTIRLGGVA LDDIPSSELH SLIGVVPQDP HLFHDTIAAN LRYGRLDATD DELRDALDAA
NLSALLNQLP DGLRTRVGAR GYRLSGGERQ RLAIARVLLQ SPQVLILDEA TSALDTVSEA
AVRAALDRLS VGRTCLVIAH RLSTVIDADR IYVMDHGRVV EDGTHGELLA DDGAYARLYR
PVTVG
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